| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0282 |
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| Symbol | |
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| ID | 4920645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 299316 |
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| End bp | 300200 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640161806 |
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| Product | putative acyltransferase |
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| Protein accession | YP_001092413 |
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| Protein GI | 127511216 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.028108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCGG TGTTATCACT AATAAGAGGC AGCTTGGCAT TTAGCTGTTA TGTCATCAAC
ACCCTTTTTT GGGTAATACC TATCTTATTG GTAAGTATAA TAAAACTTAT CCCTGTCACG
CCGCTACGTA CCCTGTGTAG CTACCTGTTG GATCACTGCG CGACCGCCTG GATCAGCGTC
AACACCTTAA TCGAACGTCT GTTCCACCGG GTAGATGTTC AGATTGAAGG CGACAGCAAT
CTCTCCCCCA AGGAATGGTA CATGGTGATC GCCAACCACC AATCCTGGGT AGATATCTTG
GTCCTGCAAC GTATCTTCAA CCATAAGATC CCTTTCCTGA AATTCTTCCT GAAGCAGGAG
CTGCTCTACG TGCCAGTGCT GGGCCTCGCC TGGTGGGCGC TAGACTTCCC ATTCATGCGC
CGATACTCAA GCGCGCAACT GCGCAAGAAT CCAAAGCTCA GGGGCAAAGA TATCGAGATC
ACCCGTAAGG CCTGCGCCAA GTTTAAGACT AAGCCGGTCA GTGTGATGAA CTTTGTCGAG
GGCACCCGCT TTAGACCCGA GAAACATCAA AAGCAAAACT CAGAGTTTAA CCACCTGCTC
AAGCCTAAGG CGGGTGGTAT GGCTTTCGCC CTGTCGGCGA TGGGCGATCA GATCCACAAG
CTAGTAGATG TCACCATCTA TTATCCAGGC AACACACCCA GCTACTGGGA CTATATCTGC
GGCCGGGTCA AACAGGTCAG GGTCCACATC AAGGTCAGCG AAATCGCTCC CGAGATGCGT
GGCGACTACC TCAATGATCG CGCCTACAAG ATCAGTTTTC AGGAACAACT CAATCGTATC
TGGCAAGAAA AGGACGCCAT GTTAACGAAA ATGGCGCAGC AATAA
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| Protein sequence | MGAVLSLIRG SLAFSCYVIN TLFWVIPILL VSIIKLIPVT PLRTLCSYLL DHCATAWISV
NTLIERLFHR VDVQIEGDSN LSPKEWYMVI ANHQSWVDIL VLQRIFNHKI PFLKFFLKQE
LLYVPVLGLA WWALDFPFMR RYSSAQLRKN PKLRGKDIEI TRKACAKFKT KPVSVMNFVE
GTRFRPEKHQ KQNSEFNHLL KPKAGGMAFA LSAMGDQIHK LVDVTIYYPG NTPSYWDYIC
GRVKQVRVHI KVSEIAPEMR GDYLNDRAYK ISFQEQLNRI WQEKDAMLTK MAQQ
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