Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0264 |
Symbol | |
ID | 4920844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 282793 |
End bp | 283794 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640161788 |
Product | serine/threonine protein kinase |
Protein accession | YP_001092395 |
Protein GI | 127511198 |
COG category | [R] General function prediction only |
COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.131936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00470067 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAGAAT CGATGCAAGG GGCGGGGTTT CATTTTCAGG CCTTGACGCC GGATCTCATC CTGGATGCCA TAGAGTCTGT GGGCATCTAC CCCGAGACAG GGCTGTTAGC GCTCAATAGT TATGAGAACC GCGTCTATCA GTTTCGCTGC GATCTGGGGC GACGCTATGT GGTGAAGTTC TATCGCCCCG AGCGTTGGAG TAACGAGCAG ATCCAGGAGG AGCACGACTT CTGCGCCGAG CTGGTGGAGG AGGAGATCCC CGTGGCGGCG CCTGTGATCA TCGAGGGACG CTCACTGCAG GATTATCAGG GCTATCGCTT CGCGCTGTTT CCCTCCATGG GCGGGCGCGC CTTCGAGGTG GATAACCTGG AGCAGCTCGA GGAGGTGGGG CATTTCATCG GCCGTATTCA TCAGATGGCC AAGCGGCGCC CCTTTGTGCA TCGTCAGACC CTGACGCCTA AGCTGCTGGG CGATGAGTCT CTGGCGTGGC TCAAGGGCTC AGATCATGTG CCGCCCAGCC TTGAGACCGC CTATTTCACC ATAGTGGAGC AGGTGCTGGA GAAGGCGAAA GCCATCTGGC ATCAATATCC CACCGAGGCG ATACGCCTGC ATGGGGATCT GCACCCCAGT AACATCTTGT GGACCCCGGA TGGTCCGGGC TTCGTGGACC TGGATGATGC CAAGATGGGG CCCGCGGTGC AGGATATCTG GATGATGCTC TCGGGCGAGC GCTCGCACCA GACCCTGCAG CTTGAGGTGT TGCTCGAGGC CTATGAGGAG TTTTGTGATT TCGATAATCG CCAGCTGCAT CTTATCGAGT CGTTGCGGGC GATGCGCATG CTGCATTACA ACGCCTGGTT GAGCCGCCGC TGGCAGGATC CCGCCTTTCC GATGCATTTC CCCTGGTACG GCGAGGAGAA ATATTGGGAG CAGCAGATCC TGGCCTTCAA GGAGCAGCTG GCTAAGTTAG ATGAGCCGCC GATCACCCTG ATCCCCTATT AG
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Protein sequence | MTESMQGAGF HFQALTPDLI LDAIESVGIY PETGLLALNS YENRVYQFRC DLGRRYVVKF YRPERWSNEQ IQEEHDFCAE LVEEEIPVAA PVIIEGRSLQ DYQGYRFALF PSMGGRAFEV DNLEQLEEVG HFIGRIHQMA KRRPFVHRQT LTPKLLGDES LAWLKGSDHV PPSLETAYFT IVEQVLEKAK AIWHQYPTEA IRLHGDLHPS NILWTPDGPG FVDLDDAKMG PAVQDIWMML SGERSHQTLQ LEVLLEAYEE FCDFDNRQLH LIESLRAMRM LHYNAWLSRR WQDPAFPMHF PWYGEEKYWE QQILAFKEQL AKLDEPPITL IPY
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