Gene Shew_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0263 
Symbol 
ID4920843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp282491 
End bp282796 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content55% 
IMG OID640161787 
Producthypothetical protein 
Protein accessionYP_001092394 
Protein GI127511197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.151206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00413273 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCAAG AGTTGAAGAT CAGCGCCATT AAGGTCGAGC CCCAGGCCAA GAGCCTGTCG 
ATTCTGGCCG ATGTGGATTT TGACCGCTTC CATCCTTTTG CCGAGGCGCT CGTTAAGGCG
CTGGATTGCC GGGTGATCGA GCGTCACTGG GGCGCGGATA GGCATCAGTG GCTGCTGGAG
TTCGAGGGCA GCCTGTTGCA GCTAAATTAT GAGTTTTATG GTGATGTTTG CTGGCTGTCT
GTGGAGCGCG ACGATGAGGT CGAGGTGCTC GTCTATCTGG CCAGCCTATT GGAGTCACAG
CTATGA
 
Protein sequence
MNQELKISAI KVEPQAKSLS ILADVDFDRF HPFAEALVKA LDCRVIERHW GADRHQWLLE 
FEGSLLQLNY EFYGDVCWLS VERDDEVEVL VYLASLLESQ L