Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0249 |
Symbol | |
ID | 4923213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 268052 |
End bp | 268594 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640161773 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001092380 |
Protein GI | 127511183 |
COG category | [R] General function prediction only |
COG ID | [COG3153] Predicted acetyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.946519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACG CATTGTACAA ACAAGAACAA ACTCAAGAAG TCATTACACT GTTCAAGGAC ACATTTTCGG ATTCAGAAGG TAAAGAAGAA GGTGCATTAA TTGCAAAACT CGTGGAAGAC TTTCTCACTT TACCAACCAA AGATGAGGAT CTTTATGTGT TTATTGCTCA AGATGAAAGT GAACGCATTG TCGGTAGCAT CATTTTCTCT CGCCTATCGT TTCCAAATGG TGAAAACATC TTCCTTTTAG CCCCCGTGGC CGTTGCAACA GATTGTCATG GGCAAGGTGT AGGTCAAGGA TTGATCAAAT TTGGCTTAGC GACACTGAAA GAAAAAGGCG TCACCGTTGC CATTACTTAC GGGGATATCA ACTTTTACTC AAAAACAGGA TTCGTTACAA TCAGTCAGGA CGTAATTCAA GCTCCGTTGG ACTTGTCCTA CCCTGAAGGT TGGATTGCAC AATCTTTAGT CGGTGAAGCG GTCCCTCACG TTGTGTGCAA ACCAACATGC TTGAAAGCGA TAGATAACCC AAGTTATTGG TGA
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Protein sequence | MKYALYKQEQ TQEVITLFKD TFSDSEGKEE GALIAKLVED FLTLPTKDED LYVFIAQDES ERIVGSIIFS RLSFPNGENI FLLAPVAVAT DCHGQGVGQG LIKFGLATLK EKGVTVAITY GDINFYSKTG FVTISQDVIQ APLDLSYPEG WIAQSLVGEA VPHVVCKPTC LKAIDNPSYW
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