| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0162 |
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| Symbol | rpsS |
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| ID | 4920673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 181977 |
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| End bp | 182255 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640161681 |
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| Product | 30S ribosomal protein S19 |
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| Protein accession | YP_001092293 |
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| Protein GI | 127511096 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0185] Ribosomal protein S19 |
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| TIGRFAM ID | [TIGR01050] ribosomal protein S19, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000728304 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000475067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCCACGTT CTCTCAAGAA AGGTCCATTC ATTGACCTAC ACTTGCTGAA GAAGGTAGAG
AAAGCGATGG AAGCGGGTGA CAAGAAGCCT ATCAAGACTT GGTCTCGCCG CTCAATGATC
ATTCCTAACA TGATTGGAAT GACCATCGCT GTCCATAATG GTCGTCAGCA CGTACCTGTG
TTCGTAACTG ACGAGATGAT CGGCCACAAG CTTGGTGAAT TTTCACCAAC TCGCACTTAT
CGCGGCCATG CTGCTGATAA GAAAGCGAAG AAGCGTTAA
|
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| Protein sequence | MPRSLKKGPF IDLHLLKKVE KAMEAGDKKP IKTWSRRSMI IPNMIGMTIA VHNGRQHVPV
FVTDEMIGHK LGEFSPTRTY RGHAADKKAK KR
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