| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0124 |
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| Symbol | |
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| ID | 4920478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 133433 |
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| End bp | 135043 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161635 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_001092255 |
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| Protein GI | 127511058 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAA TAACGCGTGA AGCAGATATG GATGCCACTC ATATTGGCGA ACATTCGACC
CACCATGAGG AGCACCCGAC GGGTATAAAA CGTTGGCTGT TTACCACCAA CCATAAAGAT
ATTGGCACCC TGTATCTCTG GTTCAGTTTC ATCATGTTCT TGACCGGCGG CGCCATGGCC
ATGGTGATCC GTGCCGAGCT GTTCCAGCCG GGTCTGCAAC TGGTGGAGCC CAACTTCTTC
AATCAGATGA CCACGGTTCA CGGCCTCATC ATGGTGTTTG GCGCCGTGAT GCCGGCCTTT
ACCGGCCTCG CCAACTGGCT GATCCCTATG ATGATAGGCG CGCCAGACAT GGCACTGCCG
CGGATGAACA ACTGGAGTTT CTGGATCTTG CCCTTCGCCT TTGCGATCCT GCTCAGTTCG
CTGTTTATGG AAGGCGGCGG GCCTAACTTT GGTTGGACCT TCTACGCCCC GCTGTCGACG
GCCTATAGCC CGGATAGCAC GGCGCTGTTT GTCTTCTCGG TACACATCAT GGGTATCAGC
TCCATCATGG GCGCCATCAA CGTGATCGTG ACCATAGTCA ACATGCGCGC TCCCGGCATG
AGCTGGATGA AGTTGCCACT GTTCGTCTGG ACCTGGTTGA TCACCGCCTT CTTGTTGATC
GCAGTAATGC CGGTACTCGC AGGTACAGTG ACCATGGTAC TGACCGACAA GTTCTTCGGC
ACCAGCTTCT TCGATGCCGC CGGTGGTGGT GACCCTGTGA TGTTCCAGCA TATCTTCTGG
TTCTTCGGCC ATCCCGAGGT CTACATCATG ATCTTGCCGT CCTTCGGCAT CATCTCCGCC
ATAGTACCGG CCTTCAGCCG CAAGAAGCTG TTCGGCTACT CTTCCATGGT GTACGCCACC
GCCAGTATCG CGATCCTCTC CTTCCTGGTC TGGGCACACC ACATGTTTAC CACAGGTATG
CCGGTATTTG CCGAGCTCTT CTTCATGTAT TGCACCATGT TGATCGCCGT GCCGACCGGA
GTGAAGGTGT TTAACTGGGT CGCCACCCTC TGGCGCGGCT CGCTCACCTT CGAGACGCCC
ATGCTGTTTG CACTGGCCTT TATCATACTC TTCACCATAG GCGGCTTCTC TGGGCTGATG
CTGGCCATCA CGCCTGTGGA TTTCCAGTAT CACGACACCT ACTTCGTCGT GGCTCACTTC
CACTATGTGC TGGTCTCGGG CGCTATCTTC TCCATCATGG CGGCGGCCTA CTATTGGCTG
CCTAAGTGGA CCGGGCATAT GTACAGCGAG AAACTCGGCA AGCTGCATTT CTGGTGCTCG
GTGATCTCGG TTAACGTGCT CTTCTTCCCC ATGCACTTCC TGGGACTGGC GGGCATGCCG
CGACGCATTC CGGACTACTC GATTCAGTTT GCCGACGTTA ACCAGATAGT CTCTATCGGC
GGCTTCGCCT TCGGCCTGTC GCAACTGATC TTCCTGGTGG TGGTGATCAA GTGCATCCGC
GGCGGCGAGC CGGCGCCCAG CAAGCCATGG GATGGTGCCG AGGGACTGGA GTGGACCCTG
CCGAGTCCGG CGCCCTACCA CTCATTCTCG ACACCACCCG AGGTGAAATA G
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| Protein sequence | MNAITREADM DATHIGEHST HHEEHPTGIK RWLFTTNHKD IGTLYLWFSF IMFLTGGAMA
MVIRAELFQP GLQLVEPNFF NQMTTVHGLI MVFGAVMPAF TGLANWLIPM MIGAPDMALP
RMNNWSFWIL PFAFAILLSS LFMEGGGPNF GWTFYAPLST AYSPDSTALF VFSVHIMGIS
SIMGAINVIV TIVNMRAPGM SWMKLPLFVW TWLITAFLLI AVMPVLAGTV TMVLTDKFFG
TSFFDAAGGG DPVMFQHIFW FFGHPEVYIM ILPSFGIISA IVPAFSRKKL FGYSSMVYAT
ASIAILSFLV WAHHMFTTGM PVFAELFFMY CTMLIAVPTG VKVFNWVATL WRGSLTFETP
MLFALAFIIL FTIGGFSGLM LAITPVDFQY HDTYFVVAHF HYVLVSGAIF SIMAAAYYWL
PKWTGHMYSE KLGKLHFWCS VISVNVLFFP MHFLGLAGMP RRIPDYSIQF ADVNQIVSIG
GFAFGLSQLI FLVVVIKCIR GGEPAPSKPW DGAEGLEWTL PSPAPYHSFS TPPEVK
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