Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0077 |
Symbol | |
ID | 4922417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 89699 |
End bp | 90652 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640161588 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001092208 |
Protein GI | 127511011 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCTATT TCGAGACAGA GCGGCTTATC TGCCGCGCCT TCGAGCGGGC CGATCTTCAG GCCTTCACCG CCTACCGCGC CGATCCTGAG GTGGCCCGCT ATCAGAGCTG GCAAGACTAC CAGTATCAGG ATGCCCTGGC ACTGTTCGAA AATTTGCAGC AGACACCTTT CGGAGCAAAC GGCACCTGGA TGCAGCTGGC CCTCGTGTGT CGTCAGACCC AGGCCTTGGT GGGAGATCTG GCGCTGCATT TCATCGATGC GCAGCAGGTC GAGATAGGCT TTACCCTGGC AAGCGAGCAT CAGGGTAAGG GGCTCGCCCG TGAGGCGTTG CAAGGGTTGT TGGTGTATCT GTTTGAGCGC CTGGGTAAAC ACAGAGTCTC GGCCATCACA GACGTGAAAA ATCGCGCTGC CTGGGGGCTA CTGGAACGGT TGGGCTTTCG CCGCGAGGCC CACTATCGCG ACAACATCTT CTTCAAGGGC AGCTGGGGCA GCGAGTATGG CTATGGCCTG CTGGCGCGGG AGTGGCGCCA GGCGCAAGTG GGTGAGCCAC TGCAGGAGTT TCGCCTGATC AAACGTGTGG CGCCTCTCAA TGATTTCCTG CGCCTTCGGC AGATAACAGG CCTGACCCCA AGGTCTCGCG AGGCGGCAGA ACTCGGCCTG CCCCTGAGTC TGTTTGGGGT GCATCTATTG GCGGGTGACA GGGTGCTCGC CATGGGCCGG GTGGTGGGCG ACGGCGCCCT CAATTTTGAG CTGGTGGATA TCGCCGTGGA TCCCGAATAT CAGGGGCGCG GCCTGGGCAG CGCTATCATG AGCGCCATCA TGGCCTATCT CGACGAGATG GCGCCTAAGG GGGCCTACAT CACCTTAATG GCTGATGTGC CTGCCCTTTA TCTCAAATTT GGCTTCGAGT ACTCGCGCCC GGCGAGCGAA GGCATGTATA AGTTACAGGC CTAA
|
Protein sequence | MIYFETERLI CRAFERADLQ AFTAYRADPE VARYQSWQDY QYQDALALFE NLQQTPFGAN GTWMQLALVC RQTQALVGDL ALHFIDAQQV EIGFTLASEH QGKGLAREAL QGLLVYLFER LGKHRVSAIT DVKNRAAWGL LERLGFRREA HYRDNIFFKG SWGSEYGYGL LAREWRQAQV GEPLQEFRLI KRVAPLNDFL RLRQITGLTP RSREAAELGL PLSLFGVHLL AGDRVLAMGR VVGDGALNFE LVDIAVDPEY QGRGLGSAIM SAIMAYLDEM APKGAYITLM ADVPALYLKF GFEYSRPASE GMYKLQA
|
| |