| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0071 |
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| Symbol | |
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| ID | 4923522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 85050 |
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| End bp | 85916 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161583 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001092203 |
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| Protein GI | 127511006 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAGTA TTGCCGAGTT GATGTCTGAG CTGGCCCCAG ATGAGGGGAT GAACGACAGC
GTATTGCCTG GTATCAAGCT GTTTCGCTGC TCCGCCTACG GTGCCCGTGG CCCCTTGTGT
TACTCCCAGG GAATCATGAT AGTTGGGCAG GGCAAGAAGC GTATCTATCT GGATAACAGG
GTGTTTGACT ATGATCCCCA GAACACCCTG GTGATGACAG TGCCCATGCC GGTGGAGTGC
GAGACCTTCG CTAGCAAGGA GGAGCCAGTG CTGGTGATGA TGATAGATAT CGATCTGGCG
CAGCTTAATC GCCTCATCCC CGTCATGGAT AATCACCACA GGGTACCCCA GGCCCTGAAT
GAGTCGCGAC TGCCGGGCTA TTTTATCGCC CCGACCGGCG AGGCGATAGA GTGCAGCATT
CATCGACTGC TGCAGGCGTT GCAATCGCCG CTGGAGGCCG AGGCGCTGGG TGAGGCCATG
GTGCTGGAGA TCCTATATCG CCTGCTGGCC CTGCCTAACG CCGCACCCCT CTATGCCCTG
GCGCTGAGTC ATACTAGATT GTCGCGCATC GACAAGGCGC TAAGCTACCT GCATAAACAT
TACGCTGCCA GTATTGAGGT GGATCAGCTT GCCGCCCTGG TGAACATGAG CCCCTCGGCG
TTTCATCGCT GCTTCAAGGA GGTGACCGCA TCATCGCCCA TCCAGTACCT GAAGAAGGTG
CGCCTGAACA AGGCCAAGGA GCTGTTGCAG CGTCCTGGGG TGAAGGTGAA GCAGGCCGCC
ATCGAGGTGG GCTACGAGAG CCCGGCCCAG TTTAGCCGCG AGTTCAAACG CTACTTCAGC
CACAGTCCGG GGGAATGTGC CAGATAA
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| Protein sequence | MKSIAELMSE LAPDEGMNDS VLPGIKLFRC SAYGARGPLC YSQGIMIVGQ GKKRIYLDNR
VFDYDPQNTL VMTVPMPVEC ETFASKEEPV LVMMIDIDLA QLNRLIPVMD NHHRVPQALN
ESRLPGYFIA PTGEAIECSI HRLLQALQSP LEAEALGEAM VLEILYRLLA LPNAAPLYAL
ALSHTRLSRI DKALSYLHKH YAASIEVDQL AALVNMSPSA FHRCFKEVTA SSPIQYLKKV
RLNKAKELLQ RPGVKVKQAA IEVGYESPAQ FSREFKRYFS HSPGECAR
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