| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0056 |
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| Symbol | |
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| ID | 4922656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 67100 |
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| End bp | 68776 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161568 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001092188 |
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| Protein GI | 127510991 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCATGC ATTTAGAGAC GAGCGACAAT TTGGCCCACC TGAAACAGGT GCGCCAGCAA
GTGTTGGGAC AGACACAAAT TCTGCAAAAC CTGATCCCAC CCACGGTGAG TTACACCACA
GAGGGCAATG TGTTGATCAT TGGCCCGGAA GACTTGGCAC GCCTGGCGGC CGATAAACTG
GCCAACATGG GTCAGCGCGC CATTCTGGCC AACGAGTCGA TCACCAGTCA GGATGAAGAC
CACCTGGAGA AGGTGATGAA CGCCGCCGAA GATGTCGAGA GCTACTACAA CAAGCTCATC
GAGATCAAAG GCTTCCTGGG TCAATTCCAG GTCAAGGTCG AGCATGACAA TGGCACTGCC
GATCTCAGCC TGGTGGCCAT TCGTAAGGCC CATTTCGATC TTATCCTCGA CCTTAGCCAA
GCGCCATGCA TCAATCTCGA GATGCTGCCG CCGGGTTACT TCTACGTGGG GCAGGATGAG
GCCAAGTTGA CGGATGCCAT CGCCCAGCTG CCCGAGCTGA TCGGTGAGTT CGACAAGCCA
CGCTACGTCA AGGTGAACAG CGATATCTGT GCCCACCACA GAAACGGTAT CGATGGCTGT
AGCCGCTGCC TCAACTTCTG TCCCGCCGAT GCCATCGCCA GCGTGGACCA TAAGATAGAG
ATCGACCCTT ACCTCTGCCA CGGTGCGGGC AGCTGTACCA ATGCCTGCCC GACCGGCGCC
ATCAGCTATG ACCTGCCGAC GCCACAGGCG CTGCACTCCT ACCTGAACAA GTTGGTGACA
CGCTTCCGTA GTGCGGCGCA GACCGCTCCA GTGATTTTAT TCCACGATGC CAGCCTGGGT
GCCTCGCTGA TCGGCGACGA GCTCCCCGGT GCCATCTTGC CGGTGGAGCT GGAGGAGATC
ACGGTTGCCA GCATGGATCA CTGGATGGCG GCCCTGGCCT GGGGCGCGCG TCAGATCTTG
GTGCTCAACA CAGAGGCCAC GGCGCCGACC CTGACCCAGA TGCTCAACGG CGAGCTCAAG
CTGGCCAACG AGATCCTCGA CGAGATGGGT CAGCCGCAGC GCGTCAGCGT GATTGAGGCC
AAGCAGATTG CCGACCTGGC CACTCTGATC GAGCCGAGCG CCAGCTGGCC CATGATAGTG
CCGGGCGAAT TTGCCGCCAC CACCAAGCGT GAGACTCTCT ACGAGGCGAT CGATCACCTC
AATAGCCAGG CCGCCTCTAC CGATGCCTGC CTGAGCAAGA GCAATATTCC TTACGGCAAG
GTGAGTGTTA ATACCGATAA CTGCACCCTG TGTCTCTCCT GTGTGTCGAC CTGTCCGACT
CAGGCGCTGA CCGACGGCGG TGAGAAGCCG GCGCTCTATT TTGTCGAGCA AGCCTGTGTG
CAGTGCGGCC TGTGTGAGTC GGCCTGTCCG GAGAAGGTGA TCAGCCTGAC ACCACAGATT
AATTTCGATG CGACTGCTCG TCAGAGCCGT CAAACCCTGA ATGAGGAGGC CCCTTTCGAA
TGTATTCGTT GTGGTACCCC ATTCGCCACC CAATCCATGG TGCAACGGAT GCTGGATGTA
GTCGGCGGAC ACAGTGCCTT CAGTGCCAAT ACCGAGCGTC TGAAGATGTG TAGCGACTGC
CGGGTAAAAG ACATGTTTGA AGACATACTT CAAGATCCTG AAAAGCAACT GCGATAA
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| Protein sequence | MSMHLETSDN LAHLKQVRQQ VLGQTQILQN LIPPTVSYTT EGNVLIIGPE DLARLAADKL
ANMGQRAILA NESITSQDED HLEKVMNAAE DVESYYNKLI EIKGFLGQFQ VKVEHDNGTA
DLSLVAIRKA HFDLILDLSQ APCINLEMLP PGYFYVGQDE AKLTDAIAQL PELIGEFDKP
RYVKVNSDIC AHHRNGIDGC SRCLNFCPAD AIASVDHKIE IDPYLCHGAG SCTNACPTGA
ISYDLPTPQA LHSYLNKLVT RFRSAAQTAP VILFHDASLG ASLIGDELPG AILPVELEEI
TVASMDHWMA ALAWGARQIL VLNTEATAPT LTQMLNGELK LANEILDEMG QPQRVSVIEA
KQIADLATLI EPSASWPMIV PGEFAATTKR ETLYEAIDHL NSQAASTDAC LSKSNIPYGK
VSVNTDNCTL CLSCVSTCPT QALTDGGEKP ALYFVEQACV QCGLCESACP EKVISLTPQI
NFDATARQSR QTLNEEAPFE CIRCGTPFAT QSMVQRMLDV VGGHSAFSAN TERLKMCSDC
RVKDMFEDIL QDPEKQLR
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