Gene Shew_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0037 
Symbol 
ID4920455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp42482 
End bp43300 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content56% 
IMG OID640161549 
Productphosphoesterase, PA-phosphatase related 
Protein accessionYP_001092169 
Protein GI127510972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAC AACAACAAGC AAAGGCAATG GGAATGCCTG CGCAAGACAA GTACCAGGGA 
CGCGGCTTTA TTGGATTACT CTTGTTTCTG CTCTGTCTTC ACCTCTTGGT GTTGAACTCG
GCAGTCAATC TATCCCTATT TCGATTCTTT AACGGCATTG CGGCCTACGC CCCAGCCGAT
CTCCTCCTGC TGATCACAGA CTTAGGCGAT GGCATCACCC TCGGGGTGAT CACTCTCTGC
TGTCTGGTGA AACGGCCAGA GCTTCTGCTC AGGGTTGTCA TCGCCAGCGT GCTGTCGCTG
ATCTTGGTGC CCCTGCTGAA GCAGACCTTC GATGCGCCTC GTCCGGCAGT AATATTAGAG
ACACTGAATA TCGTCGGTGA GATCCGCCTG AAACACAGTT TTCCTTCGGG CCATACCGCC
ACCGCCTTCC TGTTTGCCGG CACTCTCTTC TTCGCCTATC GGCAGACCCA GATTAAATGC
CTGGCAATCG CTTTCGCCAG CCTGGTGGGC CTGTCTCGCA TCGTCGTCGG CGCGCACTGG
CCAGAGGACG TGATCATGGG CGCCTTCGTC GGTCTCTTCT GCGCCTATGC GGCGGCCCAC
TGCCCCCTGG TCAAGCTCAC CCAGTTCCAC AAGGCGCTCA TCTTGGCCTT CCTCTGGTGT
GTGTTGGTGG TGAGCGAGCT GGATAAGAGT TTCGACAAAG ATCATATCTG GCCAATACTC
ATGCTCAGAT GGGGCCTAAT TGCCACGGCC GCCCTGTTGA TCTGGCGTGA ATATGGCGCC
ATGCACAGGG TAAGACGTTG GCTGGCGTTT CAAGGTTAA
 
Protein sequence
MNLQQQAKAM GMPAQDKYQG RGFIGLLLFL LCLHLLVLNS AVNLSLFRFF NGIAAYAPAD 
LLLLITDLGD GITLGVITLC CLVKRPELLL RVVIASVLSL ILVPLLKQTF DAPRPAVILE
TLNIVGEIRL KHSFPSGHTA TAFLFAGTLF FAYRQTQIKC LAIAFASLVG LSRIVVGAHW
PEDVIMGAFV GLFCAYAAAH CPLVKLTQFH KALILAFLWC VLVVSELDKS FDKDHIWPIL
MLRWGLIATA ALLIWREYGA MHRVRRWLAF QG