| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0023 |
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| Symbol | |
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| ID | 4922350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 27056 |
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| End bp | 27583 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640161535 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_001092155 |
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| Protein GI | 127510958 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG4635] Flavodoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000262535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGTA CCCTAATTAT CTATTCTACC GTAGACGGTC AGACGAAAGC CATCTGTGAT
CAGATTGCCG AGCAGTGCAA GTCGGATACC CAGCCGGTGA CCATGGTCAG CCTGGAAGAG
GCCCAGTCGG TCAACCTCTC CTATTTTGAC AAGGTCATCA TAGGGGCGAG CATTCGTTAC
GGCAAACACA GACCCGAGCT GTTCCAATAT GTGAACCGTC ACAGAGCCGT GTTAAATGGC
AAGAAGAACG CCTTCTTTAC CGTGAACGTG GTGGCGAGAA AGCCGGAGAA GAATACGCCC
GAGACTAACC CTTACATGAA GAAGTTTCTG CAGCTGTCGC TGTGGCAGCC TCAGCAGCTG
GGAGTCTTTG CGGGTAAGAT CGATTATCCC AAGTACCGTT TCTTCGATAA GTTCATGATC
CGTTTCATTA TGTGGATCAC TAAGGGCCCC ACAGATACCT CGGGTACCTA TGAATTTACC
GATTGGGATA AGGTGCAGGA GTTTGCGAAA GCCTTTAGCG AGCGTTAA
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| Protein sequence | MSRTLIIYST VDGQTKAICD QIAEQCKSDT QPVTMVSLEE AQSVNLSYFD KVIIGASIRY
GKHRPELFQY VNRHRAVLNG KKNAFFTVNV VARKPEKNTP ETNPYMKKFL QLSLWQPQQL
GVFAGKIDYP KYRFFDKFMI RFIMWITKGP TDTSGTYEFT DWDKVQEFAK AFSER
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