| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0003 |
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| Symbol | recF |
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| ID | 4923064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2684 |
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| End bp | 3766 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640161515 |
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| Product | recombination protein F |
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| Protein accession | YP_001092135 |
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| Protein GI | 127510938 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0188151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000523089 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTTAT CTCGCCTTCA TATCGATTCC TTTCGTAATA TCGCCAGTGC CCAGTTGCAG
CTCGGTGACG GCCTGAATCT AATCTATGGC CAGAACGGCA GCGGCAAGAC CAGTATTCTC
GAAGCCATCT TCTTTCTGGG GATGGGGCGC TCCTTTCGCA GTCACCTGTC TCAGCGAGTA
ATTCAGAACG ATCAGGACAA GCTGACCCTG TTTGCCCAGC TCGAGCAGGG TGAGCAGGAG
ACCAAGATAG GGCTTAGGCG TTATCGCTCG GGTGAAACCG AGGTCAAAAT GAACGGCGAA
AAGGTGAAAC GTCTGTCCAC CTTAGCCGAA ACTTTGCCCA TTCAGGTGAT CACGCCGGAG
AGTTTTTCAT TGCTTTTTGA GGGGCCAAAA TCCCGTCGTC AGTTTATCGA CTGGGGCGCC
TTTCATACCG ACAAGAGTTT CTATACTGCC TGGGCAAATG TAAGGCGAAT TTTAAAGCAT
AGAAATCAGA TGCTTAAAAG CGAAACCCCT TATCAACAGA TTCAATTTTG GGATAAGGAA
TTGGTGCGCT ATGCCGAAAT CGTGACTGAG ATACGAAAGC GATATGTAGG CTCGTTAAAT
GAACGACTTA AGGGTATAAT CGAAGAGTTT TTACCTCAGG TTGATGTTAA GGTTTCCTTT
ACCCGAGGCT GGGATAGTAA AACTGATTAT CAGACCCTGT TGCAGGCACA ATATCCCAGA
GATTTAGCGG CGGGACACAC GGCCAGTGGT CCTCATAAGG CCGACCTGAG ATTAAGGGTC
GGGACTTTGC CGGTACAAGA TGCCCTGTCC CGAGGGCAAT TGAAGTTGCT TGTATGCGCA
CTGCGTATTG CACAGGGAAA GTTGCTCAAA CAACAAATAG ATAAAAACAG TATTTATCTG
GTGGACGATC TGCCATCGGA ATTGGATGCT AGGCACAGGC AACTCTTGCT GCAGCAGCTA
AGCGATACGG GCGCACAAGT CTTTGTCACC GCCATCGAGC CTGCGGCAAT AATGGATTCG
TTAAACACGC CACCCGTTAA GGTGTTCCAT GTGGAACAAG GGCGTGTAAC GGTAATTGAA
TAA
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| Protein sequence | MSLSRLHIDS FRNIASAQLQ LGDGLNLIYG QNGSGKTSIL EAIFFLGMGR SFRSHLSQRV
IQNDQDKLTL FAQLEQGEQE TKIGLRRYRS GETEVKMNGE KVKRLSTLAE TLPIQVITPE
SFSLLFEGPK SRRQFIDWGA FHTDKSFYTA WANVRRILKH RNQMLKSETP YQQIQFWDKE
LVRYAEIVTE IRKRYVGSLN ERLKGIIEEF LPQVDVKVSF TRGWDSKTDY QTLLQAQYPR
DLAAGHTASG PHKADLRLRV GTLPVQDALS RGQLKLLVCA LRIAQGKLLK QQIDKNSIYL
VDDLPSELDA RHRQLLLQQL SDTGAQVFVT AIEPAAIMDS LNTPPVKVFH VEQGRVTVIE
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