Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4456 |
Symbol | |
ID | 5369311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009661 |
Strand | + |
Start bp | 78687 |
End bp | 81926 |
Gene Length | 3240 bp |
Protein Length | 1079 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640819252 |
Product | type III restriction protein res subunit |
Protein accession | YP_001355474 |
Protein GI | 152998553 |
COG category | [V] Defense mechanisms |
COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAT CAGCGCATCA GGAAAAGCAT TTTCAACGTT ACATTGTTGA GAGGCTGGTC GAGCAAGGCT GGAAGCTGGG AGATACCAAA CACTACGATA CCGAACGAGC GCTTTACCCG GAAGACCTCG AAGCCTGGAT AAAAACTAGC GGCCAAAAGG ATAAGTGGGA GAAGCTGGAG CGGTTAAACG GTACAAAAAC CCTCGACGTG GTGATGGAGC GACTGACCAA GGCATTGGAG CAACAGGGTG CGGTTCAGGT GCTACGTCAA GGCTTCTCAA TTGCAGGCTG TGGTCTGATT GAAATGACTG AAACTGCCCC TGAAGATATG CGCAACGAAG CGGTGATAGA GCGCTACAAG GCCAATATTC TGCGTGTTGT ACCGGAACTG AAATACCATC CTGCGCGTGA GTTTGCGATT GACTTAGTAT TCTTCATAAA TGGCATGCCT GTCGCAACTG TTGAGCTAAA AACGGACTTC ACTCAGTCAG CAGAAGCGGC TATGGAGCAA TACCAACAAG ATCGACTGCC ATTTGACCCC AAAACCAAGC GTAAAGAACC TTTGTTGACC TTTAAGCGCG GTGCCGTGGT GCATTTTGCC ATGTCGGATT CTGAAATCAT GATGGCGACC AAACTGGATG GCGTAAATTC CTTCTTCCTG CCCTTCAATA AAGGGCATGA GGGGCGAGCT GGCAACCCAC CTGGTGAAAA GAAACCGGAT GGTAGCATTG AATACCCTGT CGCTTACTTT TGGGAGGATG TGTGCCAACC CGATGCATGG TTACGCATAT TCCATAGCTT TGTGTATGTA GAGAAAAAAG ATGTGGTTGA TATTCATGGC AATTGGTCCA AAAAAGAAAC GCTCATTTTT CCGCGTTTTC ATCAATGGAC GGCAGTGAAT AACATGATTG CAGATGCCCG CAAGAACGGT GCAGGCATGA CCTATCTGGC TGACCATAGC GCCGGATCAG GCAAGACCAG TACTATTTCA TGGACGGCTC ATGATTTAGT GAAATTACGG GAAGACAATG GCGATGCGGT ATTTAACAGT GTCATTATTG TAACCGACCG TAATGTATTA GATGGGCAAC TACAAGATGC TGTAAAGCAA ATTGACCATC AGTTTGGTGT GATTGCTGCG ATAGATCGAC AGAAGTCATC GCAATCAAAA AGCAAGCAAC TTTCAGAGGC CTTGATCAAT GGTACACCTA TAGTTGTGGT CACTATTCAG ACCTTCCCTT ACGCCATGGA AGCAGTTATT ACCGACAAGG CACTTAAGGG TAAGCGTTTT GCAGTGATTA TCGATGAAGC CCATAATTCT CAAACAGGTT CTACCGCCGC CAAATTACAG ACCGCTCTTG GGATGAGTGG GCACGGAAAA ATGTCCAGCA TGACTGTGGA TGAACTGTTA GAGCAACTGC AAAAATCACG TGCTCGGCCC GACAACATTA GCTACTTCGC GTTTACAGGT ACACCTAAAC ACGCGACCTT AATGCTCTTT GGTCGACCTG AAGACACGTC AAATCCGACA TCAAAAGAAA ATCCACCCAA AGCTTTTCAC AAGTACACCA TGCGACAAGC AATTGAAGAA GGCTTTATCC TTGATGTTTT AAAAGGATAC GTACCGTATC AAACCGCCTT TAATCTGTCG AAACAGCTTG AAGACAGTAA GCGTGTGAGT GGTAAGGCAG CAAAACGTGC ATTAGCTCAA TGGATGGCAC TACATCCGAC CAATGTTACT CAGAAAGTCC AATTCATTAT TGAGCATTTC TCTAAAAACG TGGCGCACCG TTTAGATGGG AAGGCGAAGG CAATGGTTGT AACGAGTTCA CGAGCTGCCG CTATTCGCTA CAAGAAAGCG TTTGACCGTT ATATTGAATT ACATAGCGAA TACAGTTTCA TCCATTCGTT GGTAGCCTTT TCTGGCAAAA TGACTGGAAA ACAGGTGATG CACAATGATG ATGAGGCTTT TGAAGAGGTA TTCGTTATTG ACGAAAACGA GGAATTTACC GAACAAAGCA TGAATCCTGA TGTACAAGGT CAAGACTTAC GCTTTGCGTT TGATCGCCCT GAATATAGAG TGATGCTAGT TGCTGACAAA TTCCAAACGG GATTTGATCA ACCGAAGTTA GTGGCAATGT ATGTCGATAA AAAAATTGCT AACCACGTCG AAATTGTGCA GACGTTTTCA CGTTTGAACC GCATGGCTCC AGGAAAAGAT GAAGTATTCA TAATCGACTT TGTGAATGAT CCGGCCAATG TACGGTATGC CTTCTCACTC TATGACGACG GTGCGCATAT CGATGATGTT CAAGAACTGA ATGTGGTTTA TGAAATAAAA GAGCGGTTGG ACGAACATGG CCTTTACAGC GAGAAAGACT TGATCGCTTT CAAAGAAGCC CGCTTCAAAA CCATTCGCGA TATTACTCAC TCTCAAACTC CGCAACACAA GGCGCTTTAT GCGGCAACAG AAGCTGCTAC TCGTCTTTAT AATGAAAAAA TGAAAATGCT TCGCGATGCG ATGGCAACGT GGGAGGGGGC TTTTGAAAAG GCTCGTGCGC AAGGTGATGA AGCAGGAATG AAATCAGCAG ATCATCATCA AGATGAATAT GCAGAGCAGA TTAAATCCTT ATTGGGTTTT AAGTCGGATC TAGGGCGCTT CTGCCGAACC TATTCTTATG TGGCACAACT TATTGATTTT GGAGATCCAG AGCTTGAGAA TTTTGCTGCT TTTTCTAAGT TATTGCAAAA GCGATTGCAC AATGAAGCCC CTGAAACTGT AGATTTGAAA GGACTGGTGC TTACAGGTTT TGATATTAAA GGGCGTGTTG TTGAACCTAT TGAGGATGAA GACAAGCCGG TTTTAGAACC TGTCGGCCCA GGTGGTGGTG GAGGTGCAGG AGACAAGCCC AAATTTGTGC AAGAAATCAT TGAAAAGCTT AATAGTTTGT TTGGGGAGGC TACGCCTATT CGAGATCAGG TTGCATTTGT TAACCAAATT AAGTCAATTG CCGGTGAAAG TGACGTGGTT ATGGCTCAGG TTGAGAGCAA CACGCGAGAA CAGGCGCTAA AAGGTAATTT ACCTGGCGCA GTACAACAAG CTGTTGTTCG TGCGCTTACT AGCCATCAGA AACTTGCCAC ACAGGTACTT AAATCAGATC GCCAAGGGAT GTCAGCTCTG GTCGATGTGA TTTATGAAAT GCTTAGAGAT GGTAAAAATA TAGATTTGGA TTTGGACTAG
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Protein sequence | MNASAHQEKH FQRYIVERLV EQGWKLGDTK HYDTERALYP EDLEAWIKTS GQKDKWEKLE RLNGTKTLDV VMERLTKALE QQGAVQVLRQ GFSIAGCGLI EMTETAPEDM RNEAVIERYK ANILRVVPEL KYHPAREFAI DLVFFINGMP VATVELKTDF TQSAEAAMEQ YQQDRLPFDP KTKRKEPLLT FKRGAVVHFA MSDSEIMMAT KLDGVNSFFL PFNKGHEGRA GNPPGEKKPD GSIEYPVAYF WEDVCQPDAW LRIFHSFVYV EKKDVVDIHG NWSKKETLIF PRFHQWTAVN NMIADARKNG AGMTYLADHS AGSGKTSTIS WTAHDLVKLR EDNGDAVFNS VIIVTDRNVL DGQLQDAVKQ IDHQFGVIAA IDRQKSSQSK SKQLSEALIN GTPIVVVTIQ TFPYAMEAVI TDKALKGKRF AVIIDEAHNS QTGSTAAKLQ TALGMSGHGK MSSMTVDELL EQLQKSRARP DNISYFAFTG TPKHATLMLF GRPEDTSNPT SKENPPKAFH KYTMRQAIEE GFILDVLKGY VPYQTAFNLS KQLEDSKRVS GKAAKRALAQ WMALHPTNVT QKVQFIIEHF SKNVAHRLDG KAKAMVVTSS RAAAIRYKKA FDRYIELHSE YSFIHSLVAF SGKMTGKQVM HNDDEAFEEV FVIDENEEFT EQSMNPDVQG QDLRFAFDRP EYRVMLVADK FQTGFDQPKL VAMYVDKKIA NHVEIVQTFS RLNRMAPGKD EVFIIDFVND PANVRYAFSL YDDGAHIDDV QELNVVYEIK ERLDEHGLYS EKDLIAFKEA RFKTIRDITH SQTPQHKALY AATEAATRLY NEKMKMLRDA MATWEGAFEK ARAQGDEAGM KSADHHQDEY AEQIKSLLGF KSDLGRFCRT YSYVAQLIDF GDPELENFAA FSKLLQKRLH NEAPETVDLK GLVLTGFDIK GRVVEPIEDE DKPVLEPVGP GGGGGAGDKP KFVQEIIEKL NSLFGEATPI RDQVAFVNQI KSIAGESDVV MAQVESNTRE QALKGNLPGA VQQAVVRALT SHQKLATQVL KSDRQGMSAL VDVIYEMLRD GKNIDLDLD
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