Gene Shew185_4448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4448 
Symbol 
ID5369310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009661 
Strand
Start bp67949 
End bp68320 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content44% 
IMG OID640819244 
Producthypothetical protein 
Protein accessionYP_001355466 
Protein GI152998545 
COG category 
COG ID 
TIGRFAM ID[TIGR02758] type IV conjugative transfer system pilin TraA 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA AAACCCAACA ACCTAATGCA CAACAAAGTG AAGTAAACGA AGAAATTCTA 
AGACTCGCAA AACATATACC CAGTGATAGC ACCATATTCA TAATGCGCTG CACCTTCCTA
TTCATCATTT GTGTCATCGC TACTTTGCTG TTGTCTTGGG ATGTACATGC TGCAGATCCT
TTTGCACCGG CTAAATCTGA AATTGTTGAT ACCGTTGGCA CCGGCTCAAC TGCACAGTTC
GCCATTCTCG TAGTGGGTTT ATGTGCCGCT GCGATTACTG GCTTTTTAAC CAAAAACTGG
GGAGCCGCTA TTGGGGCTTT TGTCGTTGGT ATGATCTTCG TCAACGTAGC CTTAAAGGTT
GTAGGTCTAT AG
 
Protein sequence
MTTKTQQPNA QQSEVNEEIL RLAKHIPSDS TIFIMRCTFL FIICVIATLL LSWDVHAADP 
FAPAKSEIVD TVGTGSTAQF AILVVGLCAA AITGFLTKNW GAAIGAFVVG MIFVNVALKV
VGL