| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4436 |
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| Symbol | |
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| ID | 5369281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009661 |
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| Strand | - |
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| Start bp | 56110 |
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| End bp | 56985 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640819232 |
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| Product | Type-F conjugative transfer system pilin assembly protein TraF |
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| Protein accession | YP_001355454 |
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| Protein GI | 152998533 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02739] type-F conjugative transfer system pilin assembly protein TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 70 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACGT TGTTAAATGA CCGCTTACAA CATGCCGCAG TATCTCCTTT TTTTCGGTGG
TCAAGCCACG CGCCGTTGGC GTGGTTGTCC ACAAAAAAAG GGGATGCGGT GGTCAACAAG
CGCAGCGCGT TAGTGCTCCT TATGCTGACA ACGTTTTGCC TCGGCGCAAA CGCAACGGAT
GCACAAGGCT GGCGCTGGTA TAACGAACCG ACCGCCCCCA AGAAGCAAGC ACTTAAAAAG
GCCGAAACGC CAAGCGTCAC ACTTACCCGA ACGCAAACGC TGACCCCGAC AGAGCAGATG
GATTGGTTTC ACAGCTACTA CCAAGACACG CTCAATGACG CGGCGATAAA CAGCCAAGAC
AGCAAGAAAG TGGAAAGGGC AATGCTGCTT AATCAGTACG TCAGCAATAA ATCCTCAGAG
TTCGGCATGA CCTTTAAAAA GGTCCTGCTA GATAACCCTG AGCTGTCTTA CACCAAAGAT
AGACCGACGG AACAAGCGGC AAGAAGCACC TATTTATCAT TAGAGCGCAA CAAGAAGATG
CGCGCAGTAC GCAGCCTTGC CGATGCGGGA TGGGGGCTGT TCTTTGTCTA CAAAGGCCAA
GAAGAAATTG ATATTGCGCT AGCGCCCAGC GTGCAGCAGT TCGCTACTGA GCATGGCATT
GAGCTACTGG GCGTCACGCT CGATGGTGTA GCACTGCCAG CCATCGTGCA GAACCGCCAA
AACGACCAGC ACATAAACGT CCCGTTTAGT CCCGCACTCG TGTTAGTTAA TCCTGGCACG
GGGGAAATGA AACCGCTCGC GTATGGCTTT ATCTCTCAAG ACGATTTACT GGGCCGCTTC
CTGAACGTGG CCACCGATTT CGCCCCTGAC TTTTAA
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| Protein sequence | MRTLLNDRLQ HAAVSPFFRW SSHAPLAWLS TKKGDAVVNK RSALVLLMLT TFCLGANATD
AQGWRWYNEP TAPKKQALKK AETPSVTLTR TQTLTPTEQM DWFHSYYQDT LNDAAINSQD
SKKVERAMLL NQYVSNKSSE FGMTFKKVLL DNPELSYTKD RPTEQAARST YLSLERNKKM
RAVRSLADAG WGLFFVYKGQ EEIDIALAPS VQQFATEHGI ELLGVTLDGV ALPAIVQNRQ
NDQHINVPFS PALVLVNPGT GEMKPLAYGF ISQDDLLGRF LNVATDFAPD F
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