Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4375 |
Symbol | gidB |
ID | 5370261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 5221999 |
End bp | 5222619 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640832641 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_001368552 |
Protein GI | 153002871 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.321441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTATCTG CCCAGTTAGA GGCTTATTTA GCCGAAATTA ATTTGCCCGC AACCGCCGAG CAAAAAAAAC AACTAATTGA TTTTGTTGGC ATGCTCAACA AATGGAATAA AGCCTATAAC CTGACATCGG TGAGAGATCC CGAAGCCATG TTGATCCGTC ATATCATGGA CAGCTTAGTG GTTTCAAAAC ATCTACAAGG TGAACGTTTT ATCGATGTGG GCACTGGACC CGGTTTACCT GGGATCCCGT TAGCGATTAT GAATCCCGAT AAACAATTTG TGTTATTGGA CAGCTTAGGT AAACGCATTC GTTTTCAAAA ACAAGTGTCC TTTGAATTAG GCATTCATAA CATCAGCTCA GTTGAAAGCC GCGTAGAAGC TTATCAACCT GAGCAAAAAT TCGACGGCGT ATTAAGTCGT GCATTTGCTT CAATCCAAGA TATGCTGACT TGGTGCCATC ATTTACCCGC CGAGCATGGG CAGTTTTATG CCCTTAAAGG CCAGTTAAAT GATGAAGAGA TGCAACATAT TCCAAGTGGA TTTGCAGTGA AAGAAGTCAT CGAGCTTAAG GTGCCTAAAC TCGATGAACA AAGACATTTA TTGAAAATAA TCAAAGAATA A
|
Protein sequence | MLSAQLEAYL AEINLPATAE QKKQLIDFVG MLNKWNKAYN LTSVRDPEAM LIRHIMDSLV VSKHLQGERF IDVGTGPGLP GIPLAIMNPD KQFVLLDSLG KRIRFQKQVS FELGIHNISS VESRVEAYQP EQKFDGVLSR AFASIQDMLT WCHHLPAEHG QFYALKGQLN DEEMQHIPSG FAVKEVIELK VPKLDEQRHL LKIIKE
|
| |