Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4362 |
Symbol | |
ID | 5373334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 5209084 |
End bp | 5211204 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640832628 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001368539 |
Protein GI | 153002858 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000023504 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATTTA AATATTCAGT TTTAGGTTTG GCCGTAGGTT CGGCATTAAT GGCTATGCCT GTGTTGGCAG AGGTGGCTAG CGACGCGAAT ATCGAGCGCA TTAATGTCAC CGGCCGCACT TTTAACGATT ATAAAGTGGG TACAGCATCA GGCGCCATGC GCGGTGATAT CGACTTAATG GATACCCCAC AATCAGTTAA TGTGATCCCC GATTTTGTCA CGGACGAACA GCTGGCGACT AACCTCGCTG AAGTGTTAGT TAATGATTCC TCTATCACTG CAGGAACCCA GCGTTGGAAC CGCCAAGTTT TTAGCATCCG TGGCTTCGAG TTAGATTCTG GTAATGGTTA TCTCATCAAT GGCCATCAGC AATGGTCCCA TTACGTACAA CCCATCGAAA CCCTGCAGCA AGTCGAAGTG TTAAAAGGCC CTTCGAGCAT GTTGTATGGT CAATCTGGCC CTGGTGGTTT AGTGAATATG GTCACTAAGA AACCAACCTA TGATTCAATG CTTAACTTAG GTTTTGATAC CGATGGCTAC GGTTCTACCC GTGCACAGCT CGATGCGGGT GGCAGTTTAA ACGAAGCACA AAGTATTCGT TACCGCGGTG TGTTAGTGAA GCAAGATACA AAATACTGGC GTGAGTATTC CGCTAATGAT GAGAACCAAG AGCGCGATCG CTGGTTAGGT TATCTCAACA TGGAATTTGA CCTAAGCGAC GATTTGTTAC TGTCGGTTAA ATACGACCAT ACCCAAGATA AAGCGGATAT CGATGCGGGT GGTTGGTTAG ATAAACAAGG TAATGTCATT GGCGAACGTA AAACCGTTTG GGATGCGCCT TGGGCCTTTA CTGACAATAC AGTGTCAAAC TTAGGTGCCG ATCTGACTTG GCATATGAGT GACAACTGGA AAGTCAAAGC GGGTTATAAC GATCAGCAGT TTAATCGCCA ACGTTTTGAT TCTGCGCCAA GTTTGATTGA AGGCTCCGAA GATCCATTCA AGGATGGTTA TAAGATTAAA CCCTTCGATC GTTACGATGA TTGGCAGCAT AAAACCGCTT ATGCCGATTT CACCGGTGAA TTTGCGTTGG CGGGAATGCA GCATCAACTG CTGATTGGGG CTAACTATCT CGATTATTTC TATCAGCAAC AAATTCACCG TGGGGCAGCT CAAACGGTTA TTCCTGGGCA GCCTATTACT CAGCCTGCTC TCGATTACCA CACAAAACCC AAAGGTAACG CGAGTACCTA TAAGTATTAC GGTTTCTACC TGCAGGATTT AATGACGCTT AATGAACAAT GGAAGTTACT TGCAGGTGTA CGTTACGACG AACAGAAGAA AGACGCTATA GGTGGGAACA GCTATGCCGT GTCGCCTAAG TTTGGGGTGA TTTATTCGCC AATGGCTAAT GGCAGTATTT ACATTAATTA TTCAAAAAGC TTTACACCAC AGGGTTCAGT GACAAGTTCA GAAGATGTAA ATGAAGGAGA TAACCTTAAG CCTGAATACG GTACTCAATA TGAATTAGGG ACTAAGTGGG AGTTGTTTGA TGACAGCCTA CTGTTAACAG CAGCACTTTT TGATATTACG GTTTCTAATG TCACCATAGA GCAAGATATT CCCGAAACGA GTGATGGCAA GAAAACTATT ACTACTCAAG GTGGCGAGCA GCATCACCGC GGTTTTGAAG TTGGTGCCCA AGGTCAGTTA GGTGAAAGCT GGTTTGTGAC TTCTTCTATG ATGTATTTAG ATGCCGAATA TAAAACGGGT GCTGGCAAGA TCGATGGGAA AATCTTAGAT GGTAAAACAC CTGTCGATGC GCCTGAATGG TCGGCGAATA TCTGGACCCG TTATGAAGTG ACTGATAACT TTGCTATGAA CTTTGGTGCC ATTTATGTGG GTGATCGCTT CGCCGATAAA GATAACAGCA TTACTAAAGG CGGCTATGTG CGCTTCGATA TAGGTGCAGC CTACACTATG GATATCATGG GTAAAGATGT GAGCCTTCGT GCCAACGTCA GAAACCTATT CGATACTGAA TATTTAGACG GTGGCAGCGA TAAGATGGTG ACTATCGGCC AAGGCCGTAA CTTTAGTGTT GCCGTCGAAG CTAAGTTCTA A
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Protein sequence | MLFKYSVLGL AVGSALMAMP VLAEVASDAN IERINVTGRT FNDYKVGTAS GAMRGDIDLM DTPQSVNVIP DFVTDEQLAT NLAEVLVNDS SITAGTQRWN RQVFSIRGFE LDSGNGYLIN GHQQWSHYVQ PIETLQQVEV LKGPSSMLYG QSGPGGLVNM VTKKPTYDSM LNLGFDTDGY GSTRAQLDAG GSLNEAQSIR YRGVLVKQDT KYWREYSAND ENQERDRWLG YLNMEFDLSD DLLLSVKYDH TQDKADIDAG GWLDKQGNVI GERKTVWDAP WAFTDNTVSN LGADLTWHMS DNWKVKAGYN DQQFNRQRFD SAPSLIEGSE DPFKDGYKIK PFDRYDDWQH KTAYADFTGE FALAGMQHQL LIGANYLDYF YQQQIHRGAA QTVIPGQPIT QPALDYHTKP KGNASTYKYY GFYLQDLMTL NEQWKLLAGV RYDEQKKDAI GGNSYAVSPK FGVIYSPMAN GSIYINYSKS FTPQGSVTSS EDVNEGDNLK PEYGTQYELG TKWELFDDSL LLTAALFDIT VSNVTIEQDI PETSDGKKTI TTQGGEQHHR GFEVGAQGQL GESWFVTSSM MYLDAEYKTG AGKIDGKILD GKTPVDAPEW SANIWTRYEV TDNFAMNFGA IYVGDRFADK DNSITKGGYV RFDIGAAYTM DIMGKDVSLR ANVRNLFDTE YLDGGSDKMV TIGQGRNFSV AVEAKF
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