| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4316 |
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| Symbol | |
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| ID | 5370449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 5149888 |
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| End bp | 5151270 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640832579 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001368493 |
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| Protein GI | 153002812 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.876739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA TAGATAATAA CCTCAAGCCT CTTCCATCGG CAGTATCGGT ATTGATTGTT
GATGATGAAC CCGGAATGCG CAGCTTTTTA AATAAGGCAC TCTCGAAGAA ATTCGCCTTA
GTCGAAACAG CAGGCAGTAT CGAAGATGCG GAGCAGCTAC GTAGCCGCTG CCATTTCGAT
TTGCTGATCG TCGACATTCG CCTGCCAGGC CGCTCAGGTA TCGAATGGCA CGAAGCGCTA
GATGAGCAGG GTCGTCGTTC TGACATCATT TTTATGACCG GCTATGCTGA CATGGAAGTG
GCGATTACTG CGCTGCGCGC GGGTGCATCT GACTTCATCA TGAAACCTTT CCACCTTGAG
CAGATGATGA CAGCGGTCGA TCGTTGTATC GAACGTCGCC TGCTTAAACG TGAAAACTTG
ATGCTGCGCC GTGAGGTTTC AATCGGTTAC TCATCGACCA TTATTGGCAG CAGTGAGGCC
ATGAAGTCGG TGAAACATAT TATCGAACGT GTGGCGCCGA CCAATGCCGT TGTGCTGATC
CAAGGTGAGT CGGGTACGGG TAAGGAATTA GTTGCACGCC AATTGCATTT GCTCAGTGGA
CGTCAGGGAC CTTTTGTCCC TGTCAACTGT GGCTCTATCG CTCCTGAATT GCTTGAAAGT
GAACTGTTTG GTCATACCGC TGGCGCATTT ACGGGTGCGA AAGGCAATCG TGAAGGTTTA
TTCAGTTTTG CCTCGGGCGG GACGATTTTC CTCGATGAAA TTGGCGAAAT GCCACTGAAA
ATGCAAACGG CATTGCTTAG AGTATTAGAG CAAAAAGCGA TTCGCCCTGT GGGCAGCGAG
AAAGAAGTGA ACATCGATGT GCGAGTGATC GCGGCAACCA ACCGCACTTT GATTGATGAA
GTGGATGCGG GAAATTTCCG CCGTGACTTA TATTATCGAC TGAATGTGCT CGATATTTTA
ATCCCGCCAT TACGTGACAG ACCCGAAGAT GTGGTCGAGT TAACCCATCA CTTCACCCGT
CAACTCGCCG CCGAATTAGG GGTTAGAGAA GTCGTGTGGA GCCATGAGGA CATGGTGAAG
TTGCAACAAC ACGAGTGGCC AGGCAATATT CGCGAGCTGC GCAATATGAT TGAGCGCTGT
ATTTTGCTGG GTAAACCACC GGCGGAATAT TGGAAACAAC AGCTAAAGAG TGAGTCTTTA
TCGACATCGG GTTATCCATT GGATTGGCCA TTAAAAGAAG TCGAAAAACA CCATGTGACC
AGCGTTGTGG ACTTACATTC TGGCAATAAG TCTGCCGCGG CGAGGGATTT AGGCGTTTCG
CGTAAGACCT TAGATCGTAA GTATAAAGAG TGGTTTGATT TTAGCGGCGA TCAGGAGTCA
TAG
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| Protein sequence | MSQIDNNLKP LPSAVSVLIV DDEPGMRSFL NKALSKKFAL VETAGSIEDA EQLRSRCHFD
LLIVDIRLPG RSGIEWHEAL DEQGRRSDII FMTGYADMEV AITALRAGAS DFIMKPFHLE
QMMTAVDRCI ERRLLKRENL MLRREVSIGY SSTIIGSSEA MKSVKHIIER VAPTNAVVLI
QGESGTGKEL VARQLHLLSG RQGPFVPVNC GSIAPELLES ELFGHTAGAF TGAKGNREGL
FSFASGGTIF LDEIGEMPLK MQTALLRVLE QKAIRPVGSE KEVNIDVRVI AATNRTLIDE
VDAGNFRRDL YYRLNVLDIL IPPLRDRPED VVELTHHFTR QLAAELGVRE VVWSHEDMVK
LQQHEWPGNI RELRNMIERC ILLGKPPAEY WKQQLKSESL STSGYPLDWP LKEVEKHHVT
SVVDLHSGNK SAAARDLGVS RKTLDRKYKE WFDFSGDQES
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