Gene Shew185_4300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4300 
Symbol 
ID5370676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5130953 
End bp5131981 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content50% 
IMG OID640832563 
Producthypothetical protein 
Protein accessionYP_001368477 
Protein GI153002796 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCCA AGTACGGCGC ATGCCTTTTC TGTTTATCCG CCAGTGTTGC CACGTTAGTG 
CAGGCTGAAT CCTTAACGAT AAGTTCCCTC GGTAATTTAG ACCTGAGCTA CGTGCAACCA
CAAAAAGTCG CCAGTTATGA GGGCAGCCCT TTGCCAGCAC AGGTTGAAAT CCTCCCCGGT
AACGATTACT GGATTAGCAC GCCGGAGAAT ATCCAGCAGA TCAGCTTCCT CGTCGGCCAA
GGCCAGCTCG TTACTAAGGG CCAAGCGATA GTCAAACTCA CAGGGCCAGA AGTGTTCCAC
TACCTTGCCC AAGTCGAAGC CGCAGGTAGC TTATATCAAC TGGCAAAGAG CCGTTATGAG
CGCAATAAAC CCTTATTAAA CAATGGCAGT ATCAGCGCCG AAAAGTGGCG CGAGATCAGC
CAAGACTACT TCAGCACTCA CCTCGAATAC GAGCACATGC AGCATTTTAT GGAGATAGTC
AAAAGCACAG ATGCCACCAC AGACTCGCTA GTGGTGGGCA CGCCAGTGGC GGGAATCGTT
AAACTCAACC AAGTAAATGG ACCTTACATG GCGGGTTCAC AGCTATTTTC ACTGGTGCCT
AGCGACAGCA TTCGCGTCAA AGTCAGCGTA CCTATGAGCC AGTCACATTC GCTCTCGGCG
GTGAACATCA ATCAGTGCCA TATCGCCATT GAGTCCATGT CGGCCATCGC CGAAGGTGCC
TTCGTGACCG CTTGGTCATC ACCCGTGCCG CAGGAGTGTA ACTTACTGTT AGGACAACAG
ATCACTGTGA TACCCGAGTA TCAAAAGGCG GTGTATTTAT TGCCTAAAAA TAGTGTTTTT
AGTTGGGAGC AAGATAGCCA AGTCTTCACT AAAACCGCCG ACACGCTCAC CTCGATTACG
ATCGATATTC TTGGTTCAAC CCCTGAGCAA TATATCGTTG AAAGCGATCA AGATCTGAGC
CAAATCCAAG TGTTATCCCA GTCGGTTGCC GCAGTCAAAG GCATAATGCT TGGCCTAGGA
GGCGAATAA
 
Protein sequence
MMAKYGACLF CLSASVATLV QAESLTISSL GNLDLSYVQP QKVASYEGSP LPAQVEILPG 
NDYWISTPEN IQQISFLVGQ GQLVTKGQAI VKLTGPEVFH YLAQVEAAGS LYQLAKSRYE
RNKPLLNNGS ISAEKWREIS QDYFSTHLEY EHMQHFMEIV KSTDATTDSL VVGTPVAGIV
KLNQVNGPYM AGSQLFSLVP SDSIRVKVSV PMSQSHSLSA VNINQCHIAI ESMSAIAEGA
FVTAWSSPVP QECNLLLGQQ ITVIPEYQKA VYLLPKNSVF SWEQDSQVFT KTADTLTSIT
IDILGSTPEQ YIVESDQDLS QIQVLSQSVA AVKGIMLGLG GE