Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4300 |
Symbol | |
ID | 5370676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 5130953 |
End bp | 5131981 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640832563 |
Product | hypothetical protein |
Protein accession | YP_001368477 |
Protein GI | 153002796 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGGCCA AGTACGGCGC ATGCCTTTTC TGTTTATCCG CCAGTGTTGC CACGTTAGTG CAGGCTGAAT CCTTAACGAT AAGTTCCCTC GGTAATTTAG ACCTGAGCTA CGTGCAACCA CAAAAAGTCG CCAGTTATGA GGGCAGCCCT TTGCCAGCAC AGGTTGAAAT CCTCCCCGGT AACGATTACT GGATTAGCAC GCCGGAGAAT ATCCAGCAGA TCAGCTTCCT CGTCGGCCAA GGCCAGCTCG TTACTAAGGG CCAAGCGATA GTCAAACTCA CAGGGCCAGA AGTGTTCCAC TACCTTGCCC AAGTCGAAGC CGCAGGTAGC TTATATCAAC TGGCAAAGAG CCGTTATGAG CGCAATAAAC CCTTATTAAA CAATGGCAGT ATCAGCGCCG AAAAGTGGCG CGAGATCAGC CAAGACTACT TCAGCACTCA CCTCGAATAC GAGCACATGC AGCATTTTAT GGAGATAGTC AAAAGCACAG ATGCCACCAC AGACTCGCTA GTGGTGGGCA CGCCAGTGGC GGGAATCGTT AAACTCAACC AAGTAAATGG ACCTTACATG GCGGGTTCAC AGCTATTTTC ACTGGTGCCT AGCGACAGCA TTCGCGTCAA AGTCAGCGTA CCTATGAGCC AGTCACATTC GCTCTCGGCG GTGAACATCA ATCAGTGCCA TATCGCCATT GAGTCCATGT CGGCCATCGC CGAAGGTGCC TTCGTGACCG CTTGGTCATC ACCCGTGCCG CAGGAGTGTA ACTTACTGTT AGGACAACAG ATCACTGTGA TACCCGAGTA TCAAAAGGCG GTGTATTTAT TGCCTAAAAA TAGTGTTTTT AGTTGGGAGC AAGATAGCCA AGTCTTCACT AAAACCGCCG ACACGCTCAC CTCGATTACG ATCGATATTC TTGGTTCAAC CCCTGAGCAA TATATCGTTG AAAGCGATCA AGATCTGAGC CAAATCCAAG TGTTATCCCA GTCGGTTGCC GCAGTCAAAG GCATAATGCT TGGCCTAGGA GGCGAATAA
|
Protein sequence | MMAKYGACLF CLSASVATLV QAESLTISSL GNLDLSYVQP QKVASYEGSP LPAQVEILPG NDYWISTPEN IQQISFLVGQ GQLVTKGQAI VKLTGPEVFH YLAQVEAAGS LYQLAKSRYE RNKPLLNNGS ISAEKWREIS QDYFSTHLEY EHMQHFMEIV KSTDATTDSL VVGTPVAGIV KLNQVNGPYM AGSQLFSLVP SDSIRVKVSV PMSQSHSLSA VNINQCHIAI ESMSAIAEGA FVTAWSSPVP QECNLLLGQQ ITVIPEYQKA VYLLPKNSVF SWEQDSQVFT KTADTLTSIT IDILGSTPEQ YIVESDQDLS QIQVLSQSVA AVKGIMLGLG GE
|
| |