Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4286 |
Symbol | |
ID | 5371081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 5114857 |
End bp | 5117043 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640832549 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001368463 |
Protein GI | 153002782 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCCCC TATCTGTTTT AACGTCATGG CGCTCGCCAT TGATCCCTGT ACTTCTCAGC ACACTCACTC TGACGGTTCA AGCCAATACG GACCCTAAGC AAGATGAGAA AGAAGATACA GAACAGATAG AAAGATTAAA CGTAGTAGGA ACCTACACCC GAGCGGCAAT GAATAGCGCC ACGGGTTTGT CTATGTCACT CAAAGAAACC CCGCAAAGCG TCACTTTGAT TACCGAAGAG ATGATCAGTG ACAAAGGCTT GATCACTATG GAGTCAGTGT TAAACCACAC TCCGGGCGTC ACTATGGTGG GTGATGCCTC TGAAAACAGT AAGATTTTCG TGCGCGGTTA TGCACTCGAC AGCGGTGTGC AAATTGACGG CTTAATCACA ACCTCTTCAT CCAATGTTTA CAGCGGCTCA ATTGATCAAG GTTTAGACCC TGTGATTGCC GAACGAGTTG AAGTGTTAAA AGGTGCGGCC GGGATCTTAA GCGGCTTAGG TGAACCTTCT GCCACGGTTA ACTTTATTCG TAAACGCCCA ACGGATGATA CCCGCGCCAC TGCAAGTGTC AGTTATGGCT CGTGGAATAC CTATAGATTA GAGGCCGATG TTTCTGGCTG GCTCACGGAT TCAGGCAATG TGAAAGGTCG ATTCGTCAGT GCGGTGAAGA AAGGCGATTC GTTTATCGAC CGCTATCAAC GCGATACCAC AGTGCTTTAT GGCGTGGTTG AAACGAGTCT AGCCGTAGAT ACTAGCTTGT CACTGTTTGC GGACTATCAA AAATCTCAAA CCGATGGCGT GTATAACTGG AACTCTAATC CTGCATTTTA TACCGATGGC ACAGCTGTCG ATTTCGGCCG CAGTTATTCC AGCTCACAGG ACTGGACCCA TTGGGACGTG ACCCAAAAAA GTCTCATGGC CGAGTTTAAA CATAGATTCG ATAACGACTG GTCACTCGTT AGTGCCTACC GTATTGCTAA CGCCACCATA GATGCATTGG CCTTTTACCC TGGCGACAAC ATAGTGAAAT CAACCGGCGA GTTTGTCGGC CCTTGGGGCG ATACCTATTC CGCCCAGCAT GATAGAGAAT CCGATACCAA CAGCTTCAAC CTGTACGCCA CGGGTAACTT CGACTTACTC GGCCGTGAGC ACAGTGCGGT GATCGGTTTT AACTATGGTG ACAACGAGTT TGACAACATC AACACGAACT CCACACCCCA ACGTCGCTAT AACGTGGCAG ATCAAGGCAA TTATCCCAAG CCTAATCTGC CTAATTCACC CACCAATGGC CAAAAAAATG AACAAAGCCA ATCGGGTGTT TACGGCACAG TCCGTATCAA TGTATTGGAT TCACTGAAGT TAATGGTCGG CGGACGCGTG AGTAACTGGT CCTACGAAAA ACATGATCTC GTGGGCAATA GCACAGATGC GACCATGGAA AAAACCGGCA TTTTCATCCC CTACTATGGC CTAGTCTACG ATGTGACCGA ACAAATCTCT GTCTATGCCA GCCGTACTGA AATCTTCAAA CCCGGCACGT ATTTTGGTGA AGATGGCCAA CTGCTCGAAC CCGCAGAAGG CACCAACGTC GAAGGCGGCA TCAAGGTCGC ACTGTTCGAT GACACCCTCA ATATGTCAGC GGCAATCTAC GAAACCAACA AAGACAACGA ACCCGAATAT GCGGGTAAAG GTCAGCTACC TTCTGGGGAT TTTATCTACG AGAGTGTCGA TGGCATTACC ACTAAGGGCT ACGAGCTAGA AATTGCCGGA CGGCTTACCG ATCTTTGGGA TATCAGTGGC GGTTATACCC ATAACGACGC GGAAGATGAA GATGGCCTAC GCCGCCAAAC CTATCTCCCC GAAGATATTT TCAAACTGAC CACTAAGTAT AACTTTGAAG ACATCCTCCC CGGTGTTACT GCGGGCGCAA GCTGGCGCTG GCAGAGCAGC ACCTTCTATC AAGGCACTAT TTGGGGTGTC GATGGCGCGC CGAATGTGGC TTACCGCCAA GCACAATCCG CCTACTCACT CGTTGACTTG ATGTTTGGCT ACCAAATAAC ACCGTCGATT TCGATGCAAG TGAACATCAA CAATATCTTC GACAAAAACT ATAACCGCTC ACTCTGGGGT TACGCAGACT TTGGCGAGCC ACGTAATGCC ACGCTGTCAT TACGTTGGAC GCTGTAA
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Protein sequence | MPPLSVLTSW RSPLIPVLLS TLTLTVQANT DPKQDEKEDT EQIERLNVVG TYTRAAMNSA TGLSMSLKET PQSVTLITEE MISDKGLITM ESVLNHTPGV TMVGDASENS KIFVRGYALD SGVQIDGLIT TSSSNVYSGS IDQGLDPVIA ERVEVLKGAA GILSGLGEPS ATVNFIRKRP TDDTRATASV SYGSWNTYRL EADVSGWLTD SGNVKGRFVS AVKKGDSFID RYQRDTTVLY GVVETSLAVD TSLSLFADYQ KSQTDGVYNW NSNPAFYTDG TAVDFGRSYS SSQDWTHWDV TQKSLMAEFK HRFDNDWSLV SAYRIANATI DALAFYPGDN IVKSTGEFVG PWGDTYSAQH DRESDTNSFN LYATGNFDLL GREHSAVIGF NYGDNEFDNI NTNSTPQRRY NVADQGNYPK PNLPNSPTNG QKNEQSQSGV YGTVRINVLD SLKLMVGGRV SNWSYEKHDL VGNSTDATME KTGIFIPYYG LVYDVTEQIS VYASRTEIFK PGTYFGEDGQ LLEPAEGTNV EGGIKVALFD DTLNMSAAIY ETNKDNEPEY AGKGQLPSGD FIYESVDGIT TKGYELEIAG RLTDLWDISG GYTHNDAEDE DGLRRQTYLP EDIFKLTTKY NFEDILPGVT AGASWRWQSS TFYQGTIWGV DGAPNVAYRQ AQSAYSLVDL MFGYQITPSI SMQVNINNIF DKNYNRSLWG YADFGEPRNA TLSLRWTL
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