Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4228 |
Symbol | |
ID | 5372937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 5042173 |
End bp | 5043093 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640832493 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001368407 |
Protein GI | 153002726 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAAATA ATCAATTTAT TGAGATACGC CATTTCGTCA CAGTTGCACA GCTCGGCAGT TATACCTTAG CGGCGCAGGC GTTAGGCATG ACAGGTTCGG CGCTCAGTAA AAGCATAGTG CGATTAGAAA CCCGCTTAGG CACTAAACTT TTACACCGCA CCACAAGGCG TGTGAGCTTA ACCAATGATG GCGATTCGTA CCTCAAAGAC TGCCAAAATG CTATGGCAAT CCTAGACAAT GCACAAAGCC GACTCGGCAG CGAACAGCAA ATTCCCTCAG GTCGAGTGCG AGTGGATTTA CCCGTGACGT TTGGGCGGCG ATATATACTG CCGACCCTAT TAGCACTGTC GCAAAAATAT CCCAAGCTCG AGTTATCTAT CACCTTCAAC GATAGAACGA CCGACTTATT CAGTGACGGC ATTGATTTGG CAGTGCGTGT CGGACAACTC GGCGACACTG TGGATTTAGT CGCCCGTAGA TTAGGGGAAC AACGCCGAGT GATCTGCGCT TCTCCTGCCT ATTTCGCTCG ACTTGGCACA CCAAAAGACA AAGCAGATCT CAGCCAGCAC CAATGCATTG TTGGCTGGCC GCTTGGGCAG CAACATCGCT GGTTACTTAA AAATGAGGAT GGGATCATCG AGGCCTATGA CATTCCAGTG CGCCACGAAA TCGCTGATTG CGAAGCCATT TTAGCGGCCA CACTGGCGGG AGTGGGTTTA GCGCAAGTGC CGATATGGTT GGTTGAGGAC TATCTTAAAA CCGGTGAACT TATCTCGGTA CTGGACGAAC TCGCCAGTGA CGACACACCT ATCCACCTTA TTTGGCTTAA AACCCCTTAC CTCCAACCCA AGCTACGGGT GATCATCGAA GAACTGGCCG AATTAGCCAA AACGCCAAAA AGTAGATTTA AGGCAGAATA A
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Protein sequence | MINNQFIEIR HFVTVAQLGS YTLAAQALGM TGSALSKSIV RLETRLGTKL LHRTTRRVSL TNDGDSYLKD CQNAMAILDN AQSRLGSEQQ IPSGRVRVDL PVTFGRRYIL PTLLALSQKY PKLELSITFN DRTTDLFSDG IDLAVRVGQL GDTVDLVARR LGEQRRVICA SPAYFARLGT PKDKADLSQH QCIVGWPLGQ QHRWLLKNED GIIEAYDIPV RHEIADCEAI LAATLAGVGL AQVPIWLVED YLKTGELISV LDELASDDTP IHLIWLKTPY LQPKLRVIIE ELAELAKTPK SRFKAE
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