| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4198 |
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| Symbol | |
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| ID | 5373581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 5002124 |
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| End bp | 5002915 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640832463 |
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| Product | competence protein ComF |
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| Protein accession | YP_001368377 |
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| Protein GI | 153002696 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCACT TTGTCAAAAG GATTTGGCCG CAATCTGCTT TGCGGATAAT GCGTTTAGGC
TATCAACTCG GCACAAGGTG GTTGGCGGGC AGTTTACCTA ACCGTTGTCT GCTGTGCCAC
CAATCCATAC CTATCCCAGA GACGGGCATT TGCATCGTTT GTCTTCAATC TGGCTTATAT
CATGGACCTA TTTGCTTAGG CTGCGGTAAG TCGATGCAAA TCGAGGTCGA TTACTGCGGG
GAATGTCAAA AGCTTCAGCC GCGTAAAGTC GTTGCGCCCT GCAGTTATCA TCAAGGGCTA
GGGGCTTGGA TTGGCGCGAT TAAATATCAG GGGCAACTTG CCGCTTTACC TGTGCTGTGT
CGCGCCTTAG TGGCACGAAT TAAGCTATTA GAACTGCAAG GATTAATCAC CTTGCCGCAA
GCGATAGTGC CAGTTCCATT GCATTCAAAA CGCTTGCAAC AACGGGGATT TAATCAGGCG
TGGTTAATTG CCCATGAGTT ATCACAGCTC TTGCAACTGC CGTTAGTAAG CGAGGAATTA
ACGCGCCAGC AAGACACTCG GCCGCAGGCC GGACTTTCAG GTGCACAGCG ACGACGCAAC
TTACACGATG CCTTTATGTT AGCGGATGAT TTTGCGTTCC AGCGTATTGC ACTGGTGGAT
GATGTGGTCA CGACAGGCAC CACAGTCTCT GAAATAGCCC GCTTATTCGA AGCGCGATAC
GTGCATGTGC AAGTATGGTG TTTGGCAAGG GCAGAGGCGC CAGGCTTGTT GGATGATGTT
GGCGCTGTTT AA
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| Protein sequence | MPHFVKRIWP QSALRIMRLG YQLGTRWLAG SLPNRCLLCH QSIPIPETGI CIVCLQSGLY
HGPICLGCGK SMQIEVDYCG ECQKLQPRKV VAPCSYHQGL GAWIGAIKYQ GQLAALPVLC
RALVARIKLL ELQGLITLPQ AIVPVPLHSK RLQQRGFNQA WLIAHELSQL LQLPLVSEEL
TRQQDTRPQA GLSGAQRRRN LHDAFMLADD FAFQRIALVD DVVTTGTTVS EIARLFEARY
VHVQVWCLAR AEAPGLLDDV GAV
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