Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4193 |
Symbol | |
ID | 5369402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4996478 |
End bp | 4998226 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640832458 |
Product | flavocytochrome c |
Protein accession | YP_001368372 |
Protein GI | 153002691 |
COG category | [C] Energy production and conversion [S] Function unknown |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [COG3976] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTATA AAAAATCCAT GATAGGTCTT ACTGTAACTG CGATAGCTAT TATTGCTGGC TGCCAAGTTA CGCATCAAAT AATAAAAAGC CAAGGTACTG CTCAAGGTAA GCATGGCGAA GTGCAGGTCG AAACAACATT CAAAGACGGG CATATTGTTG CGATTGATGT ACTTAAGCAA AAGGAAAATA AAGTCCTTGC AGGTGCCGTA TTTAAAGATG TGAAACAGGC AATTATTGAT AACAACTCTA TCGAGGTTGA TGGTATCACT GGTGCAACAG TGACGTCTAA AGCGCTAAAA GAAGCCGTGG GCAAGAGTAT TGAAGCCGCA GGGGTAACAC TAGTTGCTGT CGCTTCAGCT AAAAAAAGTG AAGCATTAAC TCCTGCAGAA TATACCTATG ATGTCGTGGT CATTGGCTCT GGTGGTGCAG GCTTTAGTGC AGGCTTAGAA GCAATGGCCG CAGGCCGAAC TGCCGTTATT ATTGAAAAAA TGCCAATTAT TGGTGGTAAC TCATTGATCT CGGGTGCTGA GATGAATGTT GCTGGTAGTT GGGTACAGAA AAATATGGGT GTGACTGATA GCAAAGACCT GTTTATTAGC GATACGTTAA AAGGTGGCGA TTTTAAAGGT GATCCTGAAA TGGTTAAGAC CATGGTCGAT AATGCTGTAG GGGCTGCAGA GTGGTTAAGG GATTACGTCA AAGTAGAATT TTATCCCGAT CAGTTATTTC AGTTTGGTGG ACATAGCGTT AAACGGGCCT TAATCCCTAA AGGTCACACT GGCGCTGAGG TTATTAGTAA GTTTTCTATT AAAGCTGAAG AAGTGGGCTT ACCGATCCAT ACTAATACTA AGGCTGAAAA GTTAATCCAA GATCAAACGG GTCGAATTGT TGGTGTAGAA GCGACTCATA ATGGAAAAAC GATTACATAC CATGCTAAAC GCGGTGTTGT GATTGCTACG GGTGGATTCT CATCTAACAT GAAAATGCGC AAAAAATACA ACCCAGAGTT AGATGAACGT TATGGTAGCA CTGGCCATTC AGGTGGTACT GGTGACGGTA TTGTGATGGC AGAAAAAATA CATGCAGCAG CTAAAAATAT GGGATATATC CAGTCATATC CTATTTGTAG CCCAACCTCT GGTGCTATCG CCTTGATTGC AGACTCTCGC TTCTTTGGTG CAGTGTTAAT CAACCAGAAG GGCGAGCGCT TTGTTGAGGA ATTAGAGCGC CGCGATGTTA TCTCACAAGC CATTTTAGCC CAACCTGGCC GTTATACTTA TGTGTTATGG AACCAAGCTA TTGAAGATGT TGCCCATACC GTTGCTATGC ACCAAGGAGA GCTAAAAGAG TTCACTAAAG ATGGTCTGAT GCATAAAGTT GATACATTGG AAGAAGCGGC GAAGGTTTTC GATATTCCAG TGGAAAAACT AGCATCGACC ATCAAAGATG TTAATCATTA TGCTGCTATT GGTAAGGATG AGGCTTTTAA TCATCGCTCA GGATTGGTTG ATTTAAGTAA AGGACCTTAT TGGATTTTAA AGGCTACACC TTCTGTGCAC CATACAATGG GTGGACTCGT GGTTGATACT CATACTCGTG TATTGGATGA GCAAGGAAAT GCTATTCCCG GCTTATTTGC CGCAGGTGAA GTGACAGGCT TAACACATGG TACTAATCGT CTTGGTGGCA ATGCCTACAC TGATATTATT GTTTTTGGTC GTATAGCAGG ACAAGAAGCG GCTAAATAA
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Protein sequence | MHYKKSMIGL TVTAIAIIAG CQVTHQIIKS QGTAQGKHGE VQVETTFKDG HIVAIDVLKQ KENKVLAGAV FKDVKQAIID NNSIEVDGIT GATVTSKALK EAVGKSIEAA GVTLVAVASA KKSEALTPAE YTYDVVVIGS GGAGFSAGLE AMAAGRTAVI IEKMPIIGGN SLISGAEMNV AGSWVQKNMG VTDSKDLFIS DTLKGGDFKG DPEMVKTMVD NAVGAAEWLR DYVKVEFYPD QLFQFGGHSV KRALIPKGHT GAEVISKFSI KAEEVGLPIH TNTKAEKLIQ DQTGRIVGVE ATHNGKTITY HAKRGVVIAT GGFSSNMKMR KKYNPELDER YGSTGHSGGT GDGIVMAEKI HAAAKNMGYI QSYPICSPTS GAIALIADSR FFGAVLINQK GERFVEELER RDVISQAILA QPGRYTYVLW NQAIEDVAHT VAMHQGELKE FTKDGLMHKV DTLEEAAKVF DIPVEKLAST IKDVNHYAAI GKDEAFNHRS GLVDLSKGPY WILKATPSVH HTMGGLVVDT HTRVLDEQGN AIPGLFAAGE VTGLTHGTNR LGGNAYTDII VFGRIAGQEA AK
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