Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4191 |
Symbol | |
ID | 5369662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4994195 |
End bp | 4995565 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640832456 |
Product | MATE efflux family protein |
Protein accession | YP_001368370 |
Protein GI | 153002689 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTG CTAAATCAAC TTGGCTCGAC CTAATGCTTA ACGGCGCGAA AAATCGTCAA TTATTGGCGC TTGCCCTGCC GATGATACTC TCCAATATCA CTATCCCACT TTTGGGCTTA GTCGATACGG CTGTCATAGG TCATCTGAGT GAAGCCTATT ATTTAGGGGG AGTCGCTGTC GGGTCAACGA TTATCACATT AATCATTTGG TTATTGGGAT TTTTGCGTAT GGCGACCACA GGTTTAGTCG CGCAGGCCTA TGGTGCAAAT GATCTTCACG CCCAGCATAA ACTCTTAGTC CAAGGCGCTA TGCTAGCTGT GTTATTGGGC GCTGGCGTAA TCGCGCTGCA AGTCCCGATA TTAAATTTAG CGCTAGGATT ATCCGAAGCG AGTAGCGAAG TCGAGCGCTA TTGCCGCGAG TATTTTCAGG TACGAATTTG GTCAACGCCC TTCGCCCTAC TCAACCTCGT AATGCTTGGC TGGCTATTGG GACGTCAGCA ACCTAAAGCC GCCATGTGGC AGCTGATATT AGCCAACCTT GCCAATATTA TTCTCGATGT GGTGTTTGTC CTCGGCTTAG GCTGGGGCGT TAAGGGCGCC GCCCTCGCCT CAGTCTTTGC CGATATCACC GCTTTCTCAG TCGCACTCAC TATGGTGTTA CAGCAACTCA AGCGCGAAGC CGATTTTCAC TTATCCCAGT TATTACCCCA TGTCACCCTG ACGGGGTACG GCAAATTACT GAGGCTCAAC ACAGATATTT TTATCCGCAG CCTCTGCCTG CAAGCGGCCT TTGCCTTTAT GACTTTTCAT GGTGCGGGTC TGGGTGATAA TACCGTTGCC GCCAATGCCG TGTTACTGAA TTTACTGCTG TTAATCTCCT ATGCACTCGA TGGCATTGCC TATTATGCCG AGGCAGAAGT CGGCCGAGCC TATGGCCAAA AACAGGCGGG GCAATTACGG GAAGCAGTGA TCTTAGCCTG GAGCTGGTCG GCCATTACTG CGTTAGGGTT CTGCGCTGTA TTCAGTCTTT TTGGTAGCAA TATTATCGCG TTATTGACCA ACATTAATGA GGTCAGAGCA ACAGCGCAAA CCTATCTTAT CTGGCTGATA TTTTTGCCTT TATGGTCTTT TAGCTCGTAT TTATTCGACG GGGTTTATAT CGGTGCAGCT AAAGGCAAAG TGATGCGCAA TAGCATGATA CTCGCCACCT TCGGTGCATT TTTCCCGACA TGGTATTTGC TGCAGCAACT ATTATTGCCT GAGCAAGGTA ACCACGCCCT TTGGGCCGCC ATGAGTGTCT TTATGATCGC CAGAAGCCTA ACGCTTGCGG GGCACTATTA TTTCAGCAAA AGCTTTTTGA AGTCAGATTG A
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Protein sequence | MNTAKSTWLD LMLNGAKNRQ LLALALPMIL SNITIPLLGL VDTAVIGHLS EAYYLGGVAV GSTIITLIIW LLGFLRMATT GLVAQAYGAN DLHAQHKLLV QGAMLAVLLG AGVIALQVPI LNLALGLSEA SSEVERYCRE YFQVRIWSTP FALLNLVMLG WLLGRQQPKA AMWQLILANL ANIILDVVFV LGLGWGVKGA ALASVFADIT AFSVALTMVL QQLKREADFH LSQLLPHVTL TGYGKLLRLN TDIFIRSLCL QAAFAFMTFH GAGLGDNTVA ANAVLLNLLL LISYALDGIA YYAEAEVGRA YGQKQAGQLR EAVILAWSWS AITALGFCAV FSLFGSNIIA LLTNINEVRA TAQTYLIWLI FLPLWSFSSY LFDGVYIGAA KGKVMRNSMI LATFGAFFPT WYLLQQLLLP EQGNHALWAA MSVFMIARSL TLAGHYYFSK SFLKSD
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