Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4138 |
Symbol | |
ID | 5370724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4939183 |
End bp | 4940391 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640832404 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_001368318 |
Protein GI | 153002637 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCGCA ATCTATTACC TATCCTGATG TCTATGGTGC TTCTCAGCCC ATTGGCAATT GATATTTACT TACCTTCAAT GCCAACTATG GCGGCAGAAT TCGCCGTATC TGCCAGTGAT GTGCAATCTA CGATCGTATT ATTTTTATTC GCCATGGGCT TAGGCCAAGT GTTGATCGGG CCATTAGCCG ACCGTTATGG CCGCCGTCCT GTGGCAATCT TTGGAGTCTT ACTCTACGGT GCGAGCAGCC TTTTAGCCGC TGCGGCTATC GAGTTCCATT GGTTACAGAT TGCCCGTTTG CTGCAAGGTT TAGCTGCCTG TTCGACTTCT ATCGTGGTGT TTAGCGCGGT GCGTGACTGC TACGATCAAA AAGAAGGCGC TAAGATTTAC AGTTACTTAA ATGGTGCCAT TTGCGTTATT CCTGCATTAG CGCCGACTTT AGGTGGTTTA TTGGCAATGC AATTTGGGTG GCGCTCAACC TTCGTTTTCA TGACGTTATA TGCCATGTTG ATGTTGCTCG TTGTCGGTTA TCGCTTACCT GAGACTCGAC CTGCCAATAC GGTTACCACA GGGCCGCTTT ACCGTTGGGG TAGATACAAG CCTGTACTGG GTAACACTCA CTTTTTGTTT TATGCCTTTG CTTGTATGTC GGCGATGGCG GCGATTTTGT GTTACGTGTC GTATGCGCCT GTGTGGCTGA TTGGGCATTT AGGGCTTTCT GAGCTCATGT TTAGTGGTCT ATTCGGTTTC AATGCCGTGT TTAATATCGT GGCCTGTTTT ACGGCGCCGC TGGTCATTCG CAAACTCGGC AATCGTCCGA CAACGATTTT GGCGCTGTCC ATACTCGTTC TGTCTGCCGC TATCACTGTG GCGGGTCAGC AATTCGGTCC GAGCACTGGA ATGATGGCAG CGTTTGCCTT TATGTTGCCC ATGTTGATGT TAGGCGTGGG ATTTTCCTTC TTACTCGGCC CAGCGACCAG TATGGCACTG TCGGCCTTCG GTGAACGAGC TGGAACGGCG GCGGCTATGT TAGGTTTTAT TCAGATGAGC GGTGCATCCG TGCTCGCTGG ACTCGTACAG CAAACGAATT TAACCGCACC TTATGCAGTG GCCTTAGTGA TGGGCGTATT TCCTATCGGT TTATTGTTGA TGATGGCACT GAGTCGATTC GACCACTGGC ATCAAGAGCA GTTAGCTGGC GAGCATTAG
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Protein sequence | MRRNLLPILM SMVLLSPLAI DIYLPSMPTM AAEFAVSASD VQSTIVLFLF AMGLGQVLIG PLADRYGRRP VAIFGVLLYG ASSLLAAAAI EFHWLQIARL LQGLAACSTS IVVFSAVRDC YDQKEGAKIY SYLNGAICVI PALAPTLGGL LAMQFGWRST FVFMTLYAML MLLVVGYRLP ETRPANTVTT GPLYRWGRYK PVLGNTHFLF YAFACMSAMA AILCYVSYAP VWLIGHLGLS ELMFSGLFGF NAVFNIVACF TAPLVIRKLG NRPTTILALS ILVLSAAITV AGQQFGPSTG MMAAFAFMLP MLMLGVGFSF LLGPATSMAL SAFGERAGTA AAMLGFIQMS GASVLAGLVQ QTNLTAPYAV ALVMGVFPIG LLLMMALSRF DHWHQEQLAG EH
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