Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4053 |
Symbol | |
ID | 5370339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4833101 |
End bp | 4835263 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640832316 |
Product | ornithine decarboxylase |
Protein accession | YP_001368234 |
Protein GI | 153002553 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAT TAAAAGTAGC CGCTAGCTTA TCTGTTAGAT CTTGTTTCGA TATCGACAGA GAAGTCGTCA ATGTATTAAC CACAGATTTT TGCGATGTGG GCGCGGCTGT AGTCTCTGTT GAGGATGTTA GAAATGGTAT TGTTGAAAAG ATTAAAAACA CCGGATTAAA ACTACCCATT TTCGTTTCAG TTTGCTGCGA AGAAACTTTC CCAGACGATG TTTGCTCATC TATTACTGGG GTATTTGAAC TCTGCGGCGA TAACACTGAC TTCTACGGAA AACAGGTTGA AACTGCGGTC GATAAATATG AGCAAGCGCT ATTACCTCCT TTCTTCGGCA CACTGAAAAA GTACGTTGAG ATGGGTAATT CCACCTTTGC TTGTCCAGGT CACCAAGGCG GACAATTCTT CCGTAAGCAT CCTGTGGGTC GTCAGTTCTT CGACTTTTTT GGCGAAACGA TTTTCCGCGC CGACATGTGT AATGCCGACG TCAAATTGGG TGATTTATTG ATCCATGAAG GCGCACCACT GGCAGCGCAG AAATATGCTG CCAAAGTCTT TAATGCCGAT AAAACCTACT TTGTACTTAA CGGGACTTCA TCTTCAAATA AAGTGGCGAC CAATGCGCTG CTTGCTAAAG GTGACCTAGT ATTATTCGAC CGCAATAACC ACAAATCAAA CCACCATGGC GCGTTAATCC AAGCTGGTGC AACACCCGTT TATTTAGAAA CCGCACGTAA TCCCTTCGGA TTTATTGGTG GCATCGACGC TCATTGCTTC CAAGAGTCCT ATTTAAGAGA TCAAATTCGC GAAGTCGCCC CAGAAAGAGC CGATGAAAAA CGCCCCTTCC GTTTAGCGAT AATCCAGCTC GGCACCTATG ACGGCACCAT CTACAATGCT CGCCAAGTGA TTGATAAAAT TGGTCATCTG TGTGATTACG TCTTGTTTGA CTCAGCTTGG GTCGGTTACG AACAGTTCAT CCCTATGATG AATGACTGCT CGCCACTCTT GCTCGAACTG ACCGCTGAAG ATCCTGGCAT TATCGTGACT CAGTCGGTGC ATAAACAGCA GGCGGGCTTC TCGCAAACAT CGCAAATCCA TAAAAAAGAT AAACATATCA AAGGACAAGA TAGATATTGC AACCATAAAC GCTTCAACAA CGCCTTTATG ATGCATGCCT CTACCAGCCC CTTTTATCCA TTATTTGCGG CGCTAGATGT GAACGCGAAA ATGCATGAAG GCGCAAGCGG TCGTTACCTG TGGCGCGAAG CGGTAAAAGC CGGCATCGAA GCACGTAAGC TACTGCTGAA AAAGTGTAAA TATATCAAGC CATTCGTGCC AACCATGATA GATGGCCGCC TATGGCAAGA CTATGAAACT GAGCAAATGG CCGATGACTT ACGTTTCTTC GAATTCGAAC CTGGTCAGAA ATGGCACTCC TTCGAAGGTT ATGACAAAGG CCAATACTTC GTTGACCCTT GTAAGTTCCT ATTAACAACA CCAGGCATAG ATGTAGAAAC CGGTAAATAT ACCGACTTTG GTATTCCAGC GACTATTCTG GCTAACTTCT TACGGGAAAA TAATATTATT CCTGAGAAGT GCGACTTAAA TTCGATTTTA TTCCTGATGA CGCCTGCGGA AGATATGGCC AAGATGCAAC ATCTGGTCTC GCAAATATCT CGATTCGAGA AATTAGTCGA TGAAGATGCG CCATTATCTG AAGTTTTACC TAACGTCTAT AACGCGAATA AAGCGCGTTA TCAAGACTAT ACCATCCGCC AACTCTGCCA AGAAATGCAC AATCTTTATG TCAGCCATGA CGTAAAACAA CTGCAGAAAG AAATGTTCCG TAAAGCGTAT TTCCCAACCA AAGTCATGGA TCCACAGGAA GCAAACCTAG AATTTATTCG TGGCAAAGTC GAATTAGTCC CACTATCAAA AATTGAGGGA AGAATCGCCG CAGAAGGCGC ACTTCCTTAC CCACCAGGTG TGCTATGTAT GGTACCAGGT GAAATATGGG GTGGCTCTGT TCAACGTTAT TTCCAAGCTC TCGAAGAAGG TATCAACTTA TTACCTGGAT TCTCGCCAGA ACTACAAGGT GTTTATCTCG AAAACACTCC TGACGGCAAA ATTCAAGCAA TGGGCTATGT ACTAAATAAA TAA
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Protein sequence | MKSLKVAASL SVRSCFDIDR EVVNVLTTDF CDVGAAVVSV EDVRNGIVEK IKNTGLKLPI FVSVCCEETF PDDVCSSITG VFELCGDNTD FYGKQVETAV DKYEQALLPP FFGTLKKYVE MGNSTFACPG HQGGQFFRKH PVGRQFFDFF GETIFRADMC NADVKLGDLL IHEGAPLAAQ KYAAKVFNAD KTYFVLNGTS SSNKVATNAL LAKGDLVLFD RNNHKSNHHG ALIQAGATPV YLETARNPFG FIGGIDAHCF QESYLRDQIR EVAPERADEK RPFRLAIIQL GTYDGTIYNA RQVIDKIGHL CDYVLFDSAW VGYEQFIPMM NDCSPLLLEL TAEDPGIIVT QSVHKQQAGF SQTSQIHKKD KHIKGQDRYC NHKRFNNAFM MHASTSPFYP LFAALDVNAK MHEGASGRYL WREAVKAGIE ARKLLLKKCK YIKPFVPTMI DGRLWQDYET EQMADDLRFF EFEPGQKWHS FEGYDKGQYF VDPCKFLLTT PGIDVETGKY TDFGIPATIL ANFLRENNII PEKCDLNSIL FLMTPAEDMA KMQHLVSQIS RFEKLVDEDA PLSEVLPNVY NANKARYQDY TIRQLCQEMH NLYVSHDVKQ LQKEMFRKAY FPTKVMDPQE ANLEFIRGKV ELVPLSKIEG RIAAEGALPY PPGVLCMVPG EIWGGSVQRY FQALEEGINL LPGFSPELQG VYLENTPDGK IQAMGYVLNK
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