Gene Shew185_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4038 
Symbol 
ID5371916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4819933 
End bp4821387 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content51% 
IMG OID640832301 
Producthypothetical protein 
Protein accessionYP_001368219 
Protein GI153002538 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTA AACAGGATTT TTTTACGCAG TTACCTGAGT TTTACTCGCA GGTGTACCCG 
CAAGGGATAA CTAAGCCTGA ATGGCTGGCA TGGAGTGATG ACGCTGCGCA ATTGATTGGC
TTGAGCCAAC CCACAGATGA GTTGTTATTG GGCTTGTCTG GCAATGCCGC CGTCGATGGC
GCGACTTACT ATGCCCAAGT GTATAGCGGC CACCAATTTG GCGGTTATAC GCCGCGCTTA
GGGGATGGAC GCTCGATCAT TTTAGGTGAA GCGATTGGCC CAAATGGCGC ATGGGATGTC
GCCCTTAAAG GCGGCGGTCC GACGCCTTAT TCGCGCCGTG GTGATGGCCG CGCTGTGATG
CGCTCTGCCG TGCGTGAGTT TTTAGTCTCT GAGGCGTTGC ATCATTTGCA CGTGCCGACG
ACCCGCGCCT TGGCCGTGAT TGGCTCTGAC CTGCCCGTAT GGCGTGAGAG CCAAGAAACC
GCAGCCATTA CCGTGCGTTT AGCCCGCAGC CATATTCGTT TCGGTCATTT CGAGTTTTTC
TGCCACAGTG AGCGCGGCCG TGCCGATAAG CTGATTCAAT TACTCAACTT CACTATTACT
CAGCACTATC CCCATTTGAG TTGTGATGCC GCAGGCTATA AAGCGTGGTT TTTACAGGTA
GTGCAAGATA CCGCCAAGAT GATTGCCCAC TGGCAGGCGG TCGGTTTTGC CCATGGCGTG
ATGAACACAG ACAATATGTC GATTCTGGGT GACAGTTTTG ACTTCGGTCC CTTTGCGTTC
CTCGATACAT TCCAAGAAGA TTTTATCTGC AATCATTCGG ATCCCGAAGG TCGTTATGCC
TTTGGACAGC AACCGGGTGT CGGTTTGTGG AACTTGCAAC GCTTAGCGCA GGCGCTTACT
CCTGTGATCC CATCCGATGA CTTAATTGCC ATTCTTAATC AATACCAAGA GGCGCTAGTG
CAGACTTATT TGCGCTTGAT GCGGGCGAAA TTAGGTCTCT CTGCAGTTGA TGTCCCGTCG
GTAGAGCAGG ACAAACAGGA TCTCGACCTC ATAGGTCGAT TCACTGTGCT GATGGAGAAG
AATCAGCTTG ATTACACTCA GACTTGGCGC CAATTAGGCA AGTTAGATCC AACCAGTAAA
CACAGTGCAC TGCGGGATGA CTTTATCGAT GTCAGCCAGT TTGATGCTTG GTACCAATCC
TACCAACAAC GATTGGGCGC AGTAGCGGAT ATCCCAACGT GGCAAACTGA GCGCAATAGT
GTGAATCCCA AATATATTTT GCGTAACTAT TTAGCCCAAG AGGCGATAAT CGCGGTGGAA
GAGGGTAATC TTGCGCCGCT GCATTTGCTG CAAAAAATCT TAACTCAGCC CTTTGCTGAA
CACGCAGAAC ATGAAGACTT GGCCAAGCGT CCACCGGACT GGGGCCAAGG TTTGATCATG
TCATGTAGTA GTTGA
 
Protein sequence
MKFKQDFFTQ LPEFYSQVYP QGITKPEWLA WSDDAAQLIG LSQPTDELLL GLSGNAAVDG 
ATYYAQVYSG HQFGGYTPRL GDGRSIILGE AIGPNGAWDV ALKGGGPTPY SRRGDGRAVM
RSAVREFLVS EALHHLHVPT TRALAVIGSD LPVWRESQET AAITVRLARS HIRFGHFEFF
CHSERGRADK LIQLLNFTIT QHYPHLSCDA AGYKAWFLQV VQDTAKMIAH WQAVGFAHGV
MNTDNMSILG DSFDFGPFAF LDTFQEDFIC NHSDPEGRYA FGQQPGVGLW NLQRLAQALT
PVIPSDDLIA ILNQYQEALV QTYLRLMRAK LGLSAVDVPS VEQDKQDLDL IGRFTVLMEK
NQLDYTQTWR QLGKLDPTSK HSALRDDFID VSQFDAWYQS YQQRLGAVAD IPTWQTERNS
VNPKYILRNY LAQEAIIAVE EGNLAPLHLL QKILTQPFAE HAEHEDLAKR PPDWGQGLIM
SCSS