Gene Shew185_4017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4017 
Symbol 
ID5372749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4796571 
End bp4797473 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content44% 
IMG OID640832282 
Productputative acyltransferase 
Protein accessionYP_001368200 
Protein GI153002519 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACGC TGTTTTCACA GATAAAAGGC TGTATCGCAT TTTTAGGCTA CGTTATAAAT 
ACCGTCTTTT GGACAATCCC AATCCTGTTG GTCAGTTTTA TAAAACTGAT ACCTATCAGT
TCGTTAAGGA CTGCAACTAG CCATGTACTC GACTTTTGTG CCAGCGCTTG GATCAGTGTT
AATGGCGTAA TTGAACGCTG CTTACATCCC GTTAAGATTG AACTGAGTGG TGACACCGAC
TTTTCCACTA AAGAGTGGTA TATGGTGATT GCCAATCACC AGTCTTGGGT GGATATCCTG
ATCCTGCAGC GGGTTTTTAA CCGAAAAATC CCTTTCTTGA AATTTTTCCT CAAGCAAGAA
CTGATTTTTG TGCCGATTTT AGGCTTAGCT TGGTGGGCGC TCGATTTTCC GTTTATGCGC
CGTTACAGCA CGGCACAGTT GCGTAAAAAT CCTAAGCTAA AGGGCAAAGA CATTGAAATT
ACTCGTAAAG CCTGTGCTAA GTTCAAGGCT AAACCGGTAA GTGTGATGAA CTTTGTCGAA
GGCACGCGCT TCAGCAAGGC TAAACATCAA AAGCAGAACT CACAGTTTCA ACATTTGTTA
AAACCCAAAG CGGGCGGCAT GGCCTTCGCG CTATCGGCCA TGGGTGAACA GATCCACAAG
CTAGTCGATG TCTCCATTTA CTACCCAGAC ACAGTGCCTA GCTATTGGGA CTACCTGACA
GGCAAGTTAC CAAGCGTTAA AGTACACATC AAGGTCTCTG ATATTGATCC TGCGATGCGT
GGCGATTATA TGAATGACCG CGATTTTAAA ATTGGCTTCC AAGAGCAGCT AAATCAACTC
TGGCTCACTA AGGATCAGGT GTTAAGCCAA CTCGCTAGCC AAGTGAATAA AGAACAAAGG
TAA
 
Protein sequence
MGTLFSQIKG CIAFLGYVIN TVFWTIPILL VSFIKLIPIS SLRTATSHVL DFCASAWISV 
NGVIERCLHP VKIELSGDTD FSTKEWYMVI ANHQSWVDIL ILQRVFNRKI PFLKFFLKQE
LIFVPILGLA WWALDFPFMR RYSTAQLRKN PKLKGKDIEI TRKACAKFKA KPVSVMNFVE
GTRFSKAKHQ KQNSQFQHLL KPKAGGMAFA LSAMGEQIHK LVDVSIYYPD TVPSYWDYLT
GKLPSVKVHI KVSDIDPAMR GDYMNDRDFK IGFQEQLNQL WLTKDQVLSQ LASQVNKEQR