| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3985 |
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| Symbol | |
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| ID | 5369413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4756421 |
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| End bp | 4757842 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640832247 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001368169 |
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| Protein GI | 153002488 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACTT CAGCAAGACG ACAATTTCAA TGTTCAAAGA TAGCCATAGT GCTGTCATTG
ATCCTGTTAC CTTTATCGGC TCAAAGCCAG ACGTTAGAAC AAGCCGTTGC ACATACGCTT
GATACGAATC CTGATTTACG TGTTGCCTTT AACCGCTTTA AAGCGCGTGA AGAACAAGTT
AATCAAGCAA TCGCAGGCTA TATGCCGACT ATTGATGTCA GTGGTGGCTA CGGCTACGAA
CAGACTGATA GCGTATCGAC CCGTAGACGA CCAAATATCG GCGATGTCGA TAGCAAAGGG
GTGGCAGAAT TAAACCGCGG AGAGTTTGGT GTTAGCTTAA AACAAATACT TTTCGATGGT
TTCTATACCA GCAGCGAAGT TGATCGTTAT AGCTTTGAAG CCAGCGCAGA CCAATGGGCA
CTGCTTGCTG CAGCTGAAGA TATGGCACTC GATGTCAGTA AGGTCTACCT CAACTATTTG
CGCACTGATG AAGTGCTGAA ATTAGCAGAG AAAAACCTTA ACAGCCATAA AGAAATTTAT
GACCAAATCA AGCAACGTAC TGATTCAGGT TTAGGCTCAA TTGCAGATCT CTCTCAAATC
ACGGGACGTT TGGCGCGGGC TAATGCCAAC GTGATTTCTG CTCGTAACAA TTTACTTGAT
GCAAAAGCGC AATACATCAG AATTGTAGAA TCGGCACCAG CAGACTTAAT CTTACCTGTT
CCCGATGCAG AAATGCTGCC AAAGGATCTA AGCTCTGGCA TTATCGCAGC ACAGGAGAAT
CACCCCATAC TCAAATCTGC AGCAAACGAT ATTAGCGCCG CAGAAAATGA GCGCTCTTCA
GTACAATCTA ATTACTACCC TCAGGTGTCT TTGGAGCTGA ATGGTAATTG GAATAATGAT
GTCGGCGGCG AAGATGGTAT CTCTGGCGCA GGAGCCTTCC GCAGTGATGT GGGTGGCTAT
AGCAATGATT TAATGGCCAT GGTTCGAGTA AAGTATAACT TATTCTCGGG CGGTAAAGAT
CTTGCCCGTG AGAAAGAAAC GGCCTACAAA CTTGGTGAAG CCAAAGAAAT CCGTCAGCGT
GCCCAGCGCG AAGTAGTGGA AGGCGTCAAT CTCGCTTGGA ACGCATTTGA ATTACTGGCA
CCTCAAAAGC AATACATTCG AGACCATGTC ATAGCCGCAA AAGATACCCA ATCAGCCTAT
GCACAACAGT TCAATTTAGG CCAACGCAGT CTTCTCGACT TGTTGGATAC CGAAAATGAG
CTCTTCGAAG CTCGTAAAGA CTATTTACAG GCAGAGTATG ATGAAATCAT TGCTAAGTAT
CGCGTGCTAA ATTCCACTGG ACGCTTATTA GACTCTCTCA GAGTCACCAG ACCTGAAGCA
TGGCGTGGAG AACGCAACTA TGAAGGAGGA GCCAACCAAT GA
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| Protein sequence | MKTSARRQFQ CSKIAIVLSL ILLPLSAQSQ TLEQAVAHTL DTNPDLRVAF NRFKAREEQV
NQAIAGYMPT IDVSGGYGYE QTDSVSTRRR PNIGDVDSKG VAELNRGEFG VSLKQILFDG
FYTSSEVDRY SFEASADQWA LLAAAEDMAL DVSKVYLNYL RTDEVLKLAE KNLNSHKEIY
DQIKQRTDSG LGSIADLSQI TGRLARANAN VISARNNLLD AKAQYIRIVE SAPADLILPV
PDAEMLPKDL SSGIIAAQEN HPILKSAAND ISAAENERSS VQSNYYPQVS LELNGNWNND
VGGEDGISGA GAFRSDVGGY SNDLMAMVRV KYNLFSGGKD LAREKETAYK LGEAKEIRQR
AQREVVEGVN LAWNAFELLA PQKQYIRDHV IAAKDTQSAY AQQFNLGQRS LLDLLDTENE
LFEARKDYLQ AEYDEIIAKY RVLNSTGRLL DSLRVTRPEA WRGERNYEGG ANQ
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