| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3960 |
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| Symbol | |
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| ID | 5370215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4708219 |
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| End bp | 4710225 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640832222 |
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| Product | fumarate reductase flavoprotein subunit |
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| Protein accession | YP_001368144 |
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| Protein GI | 153002463 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACTGA TTTATACCGA TTCATTAGTA GTAGGCGCCG GACTTGCAGG CTTAAGGGTC
GCCATCGCCT CCAAAGAGCG GGGGCTCGAT ACCTTAGTCC TCTCACTCAT TCCTGCGAAA
CGCTCCCACT CAGCTGCTGC CCAAGGCGGT ATGCAGGCGA GCTTAGGCAA TGCCGTAAAA
GGCATGGGCG ATGATGAAGA TGTGCATTTT CAAGATACGG TAAAAGGTTC CGACTGGGGC
TGCGATCAAG ATGTGGCGCG GATGTTTGCT CACTGTGCGC CCAAGGCTGT GCGTGAATTA
GCGACGTGGG GCGTGCCTTG GTCAAGGGTG AGTGCAGGCC CAAGAGAGGT GATTGTGAAC
GCGCAAAAAG TGACGCTGCA TGAGGCGCAG GAAGCCCATG GACTGATTAA CGCCCGTGAC
TTTGGCGGCA CAAAAAAATG GCGCACTTGC TACACGGCCG ATGGTACGGG TCATTCGCTG
TTATACGCTA TGGATAACAA AGCGATTTCT ATGGATATTC CCGTCCATGA ACGTATCGAA
GCGCTGGCAC TGATTCACGA TGGTAAACGT TGCCATGGGG TGATCGCCCG CTGTTTGATA
ACCGGTGAAC TCAGGGCCTA TGTGGCTAAG TCCACCACCA TCGCCACTGG CGGATATGGC
CGCATTTATG AAGTGTCGAC CAATGCGATC ATCTGCGAAG GCATTGGTCA AGCACTCGCG
TTAGAAACAG GCGTGGCAAG GCTTGGCAAT ATGGAAGCGG TACAATTCCA TCCGACTGCT
ATCGTGCCCG TGGGCATTTT AACTACAGAA GGGTGCCGTG GTGATGGCGG CTTATTGCGC
GATAAAGACG GTTACCGTTT TATGCCAGAC TATGAGCCCG ATAAAAAAGA GTTGGCATCG
CGGGATGTGG TATCGCGCCG CATGACAGAA CACATACGTA AAGGTAAGGG CGTCGATAGC
CCCTATGGGC CGCATTTGTG GCTGGATATT ACCCTGTTAG GTCGCAAGCA CATCGAAACT
AACCTTAGGG AAGTGCAGGA AATTTGTGAG AACTTCCTCG GTATCGATCC CGCTAAGGAT
TGGATCCCAG TACGGCCAAC GCAGCATTAT TCCATGGGCG GCATTCGAAC CAATGCTACG
GGTGAAAGCC CGCAGCTTAA AGGCTTGTTT AGCGTCGGCG AAGCGGCGTG TTGGGACATG
CACGGTTTTA ACCGTTTAGG CGGTAATTCG TTGGCCGAAA CCGTGGTTGG CGGCATGATT
ATTGGTAAAT ATGTCGCCGA TTTCTGTGAG AACAATAGCC TAGAGATAGA CACTCAGCTT
GCTGAACGCT TTATGCAGCA GGTGCAGAGT GAAATTGATC TGCTGATCGA AGGTGATGGC
CACGAGAGCG CCTTTGCCCT CAAACGTGAA ATGCAGCGCA TTATGATGGA TTATGTGGGG
ATTTTCCGTA ATGGCCCTGA GCTTGATAAA GCGGTTGCCG AGCTAAAAGT GCTGCTCGAA
CGTTCGCGTA AGCTTGGGCT TAAGTGTAAA AAGCGTCACA CCAATCCTGA GCTGGTCGAA
GCCCTGCGGG TTAAGCGCAT GCTCAAAGTA GCGCTGACTG TGGCCTGCGG CGCAGCGGCA
CGAACCGAAA GTCGTGGTGC CCATGCTCGA GAAGATTATC CACAGCGAAA TGATCGAGAC
TGGCTAAATC GTACCTTAGC CAGTTGGCCG GATCCCGATG CGCTCGAACC TGTGCTTAAT
TACGAATCAC TCGATGTGAT GAAGATGGAA CTCCCGCCGG GTTATCGTGG CTATGGTATT
AACAACGCCA TAGTGCACCC CGATACCGAA AAACGTGAAC AGCAGATTGC CAATATTTTA
GCCGAGCTAG GCGATGATGC TGACCGTTAT CAACGCCAGC GGGCACTTAT GCCCTTTGAA
TTACCCGAAA GCTTACAACC TAATAATGAA CGTTTAAGTG ATAATTTAAA AAGCCCGTCC
GCCAATGCGT TAGGAGAAAA ATCATAA
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| Protein sequence | MKLIYTDSLV VGAGLAGLRV AIASKERGLD TLVLSLIPAK RSHSAAAQGG MQASLGNAVK
GMGDDEDVHF QDTVKGSDWG CDQDVARMFA HCAPKAVREL ATWGVPWSRV SAGPREVIVN
AQKVTLHEAQ EAHGLINARD FGGTKKWRTC YTADGTGHSL LYAMDNKAIS MDIPVHERIE
ALALIHDGKR CHGVIARCLI TGELRAYVAK STTIATGGYG RIYEVSTNAI ICEGIGQALA
LETGVARLGN MEAVQFHPTA IVPVGILTTE GCRGDGGLLR DKDGYRFMPD YEPDKKELAS
RDVVSRRMTE HIRKGKGVDS PYGPHLWLDI TLLGRKHIET NLREVQEICE NFLGIDPAKD
WIPVRPTQHY SMGGIRTNAT GESPQLKGLF SVGEAACWDM HGFNRLGGNS LAETVVGGMI
IGKYVADFCE NNSLEIDTQL AERFMQQVQS EIDLLIEGDG HESAFALKRE MQRIMMDYVG
IFRNGPELDK AVAELKVLLE RSRKLGLKCK KRHTNPELVE ALRVKRMLKV ALTVACGAAA
RTESRGAHAR EDYPQRNDRD WLNRTLASWP DPDALEPVLN YESLDVMKME LPPGYRGYGI
NNAIVHPDTE KREQQIANIL AELGDDADRY QRQRALMPFE LPESLQPNNE RLSDNLKSPS
ANALGEKS
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