| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3943 |
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| Symbol | |
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| ID | 5369711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4690431 |
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| End bp | 4691702 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640832205 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001368127 |
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| Protein GI | 153002446 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACGG CAACGACCAC AAGAAAGCCT CGCACCAAGA AAGCCGAGCA AAAAAGCCAA
TCCAAAATCT ATACTTTCGA ATGGAAAGGT GTTAATCGCG ACGGCAAGAA AACCGCAGGT
GAACTCAGAG GCGCAACTGC CGCCGAAATC CGTAGTCAGT TAAAATCCCA AGGAGTTAAC
CCTAAGAGCG TTCGTAAGCA ATCTTCTCCG CTCTTTAAGC TAGGTGATGC CAGTATTACC
CCTATGGATA TTGCTATGAT GACTCGCCAA ATCGCGACTA TGCTAGCGGC GGGCGTACCT
TTAGTCACCA CAATTGAACT ACTCGGCCGC GGCCACGAAA AAGCTAAGAT GCGTGAATTA
CTTGCAAATA TTCTCAGCGA AATTCAATCA GGCATTCCCT TATCCGATGC GATGCGCCCT
CATAGGCGTT ACTTCGATGA GCTATATGTT GACCTAGTTG CAGCAGGTGA ACATTCTGGT
TCACTAGACT TGGTCTTCGA TCGTGTTGCT ACTTATAGAG AAAAAACGGA AGCACTCAAA
TCAAAAATTA AGAAGGCCAT GTTCTATCCC GCCGCTGTTG TCATAGTCGC GATATTAGTA
ACAACCTTAT TATTACTCTT TGTCGTCCCA CAGTTTGAAG ACATCTTCAA AGGCTTTGGG
GCTGAACTGC CCGCCTTTAC CCAACTGGTG CTGCATATTT CCCGCGGCTT ACAATCCTCT
TGGTATATCT TTTTAGCTGC CATTGTAGGC GGAGTATTTT TATTCGTTAG AGCCCACAGA
AACTCCCAAA TTTTACGTGA TAGAGTCGAT GAAGCTGTAC TTAAAATCCC AGCCATTGGG
CCGATTTTAC ACAAAGGAGC CATGGCTCGA TTCGCCCGGA CTTTAGCGAC TACCTTCGCC
GCGGGTGTGC CACTCATTGA TGGCTTAGAA TCCGCAGCTG GCGCATCGGG TAACGCGGTA
TACCGCAAAG CTATTTTAAA AATTCGTCAA GAAGTCATGG CGGGGATGCA GATGAATGTG
GCTATGCAGA CCACAGGACT TTTCCCCGAT ATGTTAGTGC AAATGGTGAT GATAGGCGAA
GAATCCGGCT CACTGGATAA CATGCTCAAT AAAGTATCAA CCATTTACGA AATGCAAGTA
GATGATGCGG TTGATGGCTT ATCAAGCCTG ATAGAACCGA TTATGATGGT GGTCATCGGC
ACTGTCGTCG GCGGTTTAAT CGTTGCTATG TATCTACCTA TATTCCAAAT GGGTAATATT
GTAGGCGGCT AG
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| Protein sequence | MATATTTRKP RTKKAEQKSQ SKIYTFEWKG VNRDGKKTAG ELRGATAAEI RSQLKSQGVN
PKSVRKQSSP LFKLGDASIT PMDIAMMTRQ IATMLAAGVP LVTTIELLGR GHEKAKMREL
LANILSEIQS GIPLSDAMRP HRRYFDELYV DLVAAGEHSG SLDLVFDRVA TYREKTEALK
SKIKKAMFYP AAVVIVAILV TTLLLLFVVP QFEDIFKGFG AELPAFTQLV LHISRGLQSS
WYIFLAAIVG GVFLFVRAHR NSQILRDRVD EAVLKIPAIG PILHKGAMAR FARTLATTFA
AGVPLIDGLE SAAGASGNAV YRKAILKIRQ EVMAGMQMNV AMQTTGLFPD MLVQMVMIGE
ESGSLDNMLN KVSTIYEMQV DDAVDGLSSL IEPIMMVVIG TVVGGLIVAM YLPIFQMGNI
VGG
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