| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3942 |
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| Symbol | |
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| ID | 5369850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4688570 |
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| End bp | 4690282 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640832204 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_001368126 |
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| Protein GI | 153002445 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCTA CAGGCCTGCA TTTAGGGTTA TCGACCCTCT TTATCCGTAA AGGTCTGCTA
AATGAAGAGC AGATGGCCAG TGCCATCACA AAATCCCGTC AAAATAAACA AGCGTTAGTC
AGCACTTTAG TACAAAGTAA ACTCATTTCA GCTCGTGCTA TTGCTGAGCT TTGCTATGAG
GAATATGGCA CGCCACTACT CGATCTCAAT GAATTTGATC TTGCTTCGAT TCCTGAGGAC
TTCCTCAATA AAAAACTGAT TGAGAAACAT CGCTGTTTAC CCCTTTTTAA ACGTGGTAAT
CGCCTCTATA TAGGCACGTC TGACCCGACC AATATTGCCG CTCTTGAGGA CTTTCAATTT
AGTGCAGGCT TGCACGCCGA AGCGATTCTA GTTGAAGAAG ATAAGCTCGC AAAAGCACTA
GAGAAAATTC TCGAGGAAGA TATCAGCGGT CTCGATTTAG GCGGCATGGA TGAAGCGGCA
CTGGCTGCGA TAGAAATTAC TGATACCGAC AGACGTAACG AAGAATCCGC AGGCGAAGCT
AGCGACGATG CGCCTATTGT TATCTATATC AATAAAATAT TGACAGATGC CATCCGTAAG
GGCGCGTCGG ATTTACACTT TGAACCCTAT GAGAAACGCT ACCGTATTCG TTTCCGTATA
GATGGTATTC TCCACGAAGT CTCTGAGCCA CCTATTAGCC TCGCAGGTCG TTTATCGGCG
CGTCTAAAGG TAATGTCGAA ACTCGATATA GCCGAACGGC GGGTACCTCA GGATGGTCGA
ATTAAGATGA AGCTTTCCCG TACTAAGTCC ATCGACTTTC GGGTAAGTAC CCTACCGACA
CTGTGGGGGG AAAAAATTGT AATGCGGATT TTGGACTCAT CCTCCGCACA ATTAGGCATT
GAAAAGCTTG GCTACGAGCC CGACCAAGAA AAGCTCTACC TTGAGATGCT GGCAAAACCA
CAAGGGATGA TTCTAGTGAC GGGGCCAACG GGTTCAGGTA AAACAGTTTC CCTCTATACA
GGGTTAAATA TTCTCAATAC CGAAGAGCGT AATATTTCTA CCGCAGAAGA TCCGGTTGAG
ATTAACCTTG AAGGCGTGAA CCAAGTTCAC ATTAATTTAA AAGCAGGGTT AACCTTCGCA
TCCGCTTTAC GTTCATTTCT ACGTCAAGAC CCCGATGTGG TGATGGTAGG AGAAATCCGT
GATCTCGAAA CCGCCGAAAT TGCCATTAAA GCGGCGCAAA CGGGTCACTT AGTCTTATCG
ACCTTGCACA CAAACTCGGC TGCCGAAACC TTAACCCGTT TAATTAACAT GGGTGTACCT
GGCTATAACA TAGCTAGTTC AGTGAATCTG ATTATTGCCC AACGCTTAGC GCGTCGCCTC
TGCCCAGAAT GCAAACAGGC TGAAGTGATA CCAGAACATG AATTACTACG CCTAGGTTTT
GCCCAAGCAC AAATTACTCA GGGCTTTACC ACCTTTAAAC CTGTTGGCTG TGAGCATTGC
TCCGCGGGCT ACAAGGGACG GGTTGGCATT TATGAAGTCA TGAAAATGTC CGATGAAATT
GCCCGCACGA TCATGGAGGG TGGTAACTCA TTGCAAATAG CCTCCCAAGC TAAAGCGCAA
GGAATGCGAG ATTTACGGCA ATCTGGGTTA TTGAAAGTGA TTCACGGTGT CACTAGTATT
GCAGAAGTCA ATCGCGTAAC CAGTTTTGGC TAA
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| Protein sequence | MPSTGLHLGL STLFIRKGLL NEEQMASAIT KSRQNKQALV STLVQSKLIS ARAIAELCYE
EYGTPLLDLN EFDLASIPED FLNKKLIEKH RCLPLFKRGN RLYIGTSDPT NIAALEDFQF
SAGLHAEAIL VEEDKLAKAL EKILEEDISG LDLGGMDEAA LAAIEITDTD RRNEESAGEA
SDDAPIVIYI NKILTDAIRK GASDLHFEPY EKRYRIRFRI DGILHEVSEP PISLAGRLSA
RLKVMSKLDI AERRVPQDGR IKMKLSRTKS IDFRVSTLPT LWGEKIVMRI LDSSSAQLGI
EKLGYEPDQE KLYLEMLAKP QGMILVTGPT GSGKTVSLYT GLNILNTEER NISTAEDPVE
INLEGVNQVH INLKAGLTFA SALRSFLRQD PDVVMVGEIR DLETAEIAIK AAQTGHLVLS
TLHTNSAAET LTRLINMGVP GYNIASSVNL IIAQRLARRL CPECKQAEVI PEHELLRLGF
AQAQITQGFT TFKPVGCEHC SAGYKGRVGI YEVMKMSDEI ARTIMEGGNS LQIASQAKAQ
GMRDLRQSGL LKVIHGVTSI AEVNRVTSFG
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