| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3933 |
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| Symbol | |
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| ID | 5369950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4676864 |
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| End bp | 4678861 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640832196 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001368118 |
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| Protein GI | 153002437 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000917222 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAT TAAAAGAAGT TTTTGTTCCT GATATCGGCG GCGATGAAGT GCAAGTGATC
GAAATTTGTG TGGCTGTGGG TGATACCCTA GCGGCAGAAG AATCGATTCT TACCGTCGAA
AGCGACAAGG CGACTATGGA TATTCCAGCG CCTTTCGCCG GTGTTTTAGC CGAATTGAAA
GTGGCTGTGG GCGATAAAGT ATCTGAAGGT ACTTTGATTG CTATGATGCA AGCAGCGGGC
GCGGCAGCTG CTGCTCCGGC TCCAGTTGCT GCACCCGCTC AGGCGGTACC AGCATCTGCA
CCAGTTCAAG CGGCTCCAGC CCCTGTGTCT GCTGCTCCTG CGACGGGCGC AACCAAAGTG
GTTGAAGTGA CTGTTCCTGA TATCGGTGGC GACACTGATG TGTCGGTTAT CGAAGTCCTG
GTTGCTGTCG GTGACAAGAT TGAAGTTGAT AGCGGTTTAA TTACCCTAGA AACAGACAAA
GCGACAATGG ACGTACCCTC ACCTTTCGCG GGTGTGGTTA AAGACGTTAA AGTCGCAGTT
GGCGATAAAG TGTCGCAAGG CTCTTTAGTC ATCATGCTTG AAGTTGGCGG CGCTGCACCT
GCAGCCGCGC CAACGGTTGC TACCCAAGCG GCTCCTGCCG CTACGGTAGC GCCAGTGGCC
GCAGCACCTG CTGCACCAGC GGCAAGCGTG GTTGCGGTAA AAGAAATTCA AGTGCCGGAT
ATTGGCGATG CCAGCAATGT CGATGTGATC GAAGTGCTCG TGTCTGTCGG TGATGAAATC
ACTGCTGACC AAGGTTTGAT TACCCTTGAA ACTGACAAAG CCACCATGGA AGTACCAGCG
CCATTCGCCG GTAAACTGCT GTCTTTGACA GTTAAAGTGG GTGACAAGGT TTCTCAAGGT
AGCGTTATTG CGACGATTGA AACTGTGACT GCAGGTGCAG CTCCAGCAGC GGTTGCTCAA
GCGGCAGCTC CTGCTCCAGT GAGCGCGGCG CCCGTTGCAG CCCCAACACC TGCAAGCCGT
CCTCCAGTAC CACACCACCC AAGTGCAGGT ACACCTGTGT CTACTGGTGC GGTACATGCG
TCTCCTGCGG TACGTCGTTT AGCCCGTGAA TTTGGTGTCG ATTTGACCCA AGTGACAGGT
TCTGGCCGTA AAGGTCGCAT TATGAAAGAA GACGTTCAGG CGTATGTGAA ATACGAACTG
TCTCGTCCGA AAGCGACTGC GGCAACCTCT GTGGGTTCAG GTAACGGCGG CGGTCTGCAA
GTGATTGCAG CACCTAAAGT TGATTTCAGT AAGTTTGGTG AAGTGGAAGA GATTCCATTA
AGCCGTATCC AGAAGATTTC TGGCCCTAAC TTACACCGCA ACTGGGTAAC TATCCCTCAC
GTGACTCAGT TCGATGAAGC TGATATCACT GAAATGGAAG AGTTCCGCAA GCAGCAAAAC
GATGTAGCGG CGAAGAAAAA AGCCGATTAC AAGATCACGC CTTTAGTGTT TATGCTAAAA
GCTGTGGCTA AAACGTTGCA ACAGTTCCCA GTGTTCAACT CAAGCTTAAG TAGCGATGGC
GAATCACTGA TCCAGAAGAA GTATTTCCAT ATCGGTGTGG CGGTAGATAC GCCAAACGGT
TTGGTTGTGC CAGTCGTGCG TGACGTGGAT AAGAAAGGCA TTATCGAGTT ATCTCGTGAA
CTGGCTGATA TCTCTATCCG TGCCCGTGAT GGCAAGCTGA AATCTGCTGA CATGCAAGGT
AGCTGTTTTA CTATTTCAAG TTTAGGTGGC ATTGGCGGTA CAGCGTTTAC GCCTATCGTT
AACTACCCAG ACGTGGCGAT TTTAGGTGTG TCTAAATCTG AAATTAAGCC TAAGTGGAAT
GGTAAAGAGT TCGAACCTAA ATTGATGTTG CCATTGTCGC TGTCATACGA TCACCGCGTG
ATCGATGGTG CTATGGCTGC ACGCTTTAGT GTGACGCTGT CAGGAATTCT GTCCGATATT
CGTACTTTGG TTCTGTAA
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| Protein sequence | MAELKEVFVP DIGGDEVQVI EICVAVGDTL AAEESILTVE SDKATMDIPA PFAGVLAELK
VAVGDKVSEG TLIAMMQAAG AAAAAPAPVA APAQAVPASA PVQAAPAPVS AAPATGATKV
VEVTVPDIGG DTDVSVIEVL VAVGDKIEVD SGLITLETDK ATMDVPSPFA GVVKDVKVAV
GDKVSQGSLV IMLEVGGAAP AAAPTVATQA APAATVAPVA AAPAAPAASV VAVKEIQVPD
IGDASNVDVI EVLVSVGDEI TADQGLITLE TDKATMEVPA PFAGKLLSLT VKVGDKVSQG
SVIATIETVT AGAAPAAVAQ AAAPAPVSAA PVAAPTPASR PPVPHHPSAG TPVSTGAVHA
SPAVRRLARE FGVDLTQVTG SGRKGRIMKE DVQAYVKYEL SRPKATAATS VGSGNGGGLQ
VIAAPKVDFS KFGEVEEIPL SRIQKISGPN LHRNWVTIPH VTQFDEADIT EMEEFRKQQN
DVAAKKKADY KITPLVFMLK AVAKTLQQFP VFNSSLSSDG ESLIQKKYFH IGVAVDTPNG
LVVPVVRDVD KKGIIELSRE LADISIRARD GKLKSADMQG SCFTISSLGG IGGTAFTPIV
NYPDVAILGV SKSEIKPKWN GKEFEPKLML PLSLSYDHRV IDGAMAARFS VTLSGILSDI
RTLVL
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