Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3913 |
Symbol | purH |
ID | 5371186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4640094 |
End bp | 4641692 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640832174 |
Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
Protein accession | YP_001368100 |
Protein GI | 153002419 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCTG CAAATAATGC CAGACCCATT CGTCGCGCGC TGTTAAGCGT TTCAGATAAA ACCGGAATTC TCGAGTTCGC CAAAGCACTT CACGCCCAAG GTGTGGAGCT GTTGTCAACT GGCGGCACCG CTCGCCTGTT AGCGGATAAC GGCGTGCCTG TTATCGAAGT ATCTGATTAC ACAGGACACC CTGAGATCAT GGACGGTCGC GTTAAGACGC TGCACCCTAA AGTGCACGGC GGCATTTTGG CGCGCCGCGG TCTTGATGAA AGCGTGATGG CCGACAACAA TATCAATGCC ATCGATCTGG TTGCGGTTAA CCTTTATCCT TTCGCTGAAA CTGTGGCTAA AGCCGGTTGT ACCTTAGAAG ACGCTATCGA AAATATCGAT ATTGGCGGCC CAACTATGGT GCGCGCAGCG GCAAAAAACC ACAAAGACGT CACCATAGTC GTTAATGCCG CCGATTACTC ACGCGTACTG GCAGAAATGA CGGCTAACAA TGGCAGCACG ACCCATGCGA CGCGTTTCGA CTTAGCGATT GCGGCCTTTG AGCACACTGC GGGTTACGAT GGCATGATCG CCAACTACTT CGGCACTATG GTTCCTGCGC ATAGCACGGA CGAATGCTTT GCTGATTCTA AGTTCCCACG CACGTTCAAC ACCCAATTAG TGAAGAAGCA AGACTTACGC TATGGCGAAA ACAGCCATCA AGCGGCGGCC TTCTATGTCG ATACGAAAAT TGATGAAGCC TCTGTGGCGA CGGCAATTCA GTTGCAAGGC AAAGCCTTGT CTTACAACAA CATTGCCGAT ACCGACGCCG CTCTTGAGTG CGTAAAAGAA TTCTTGGAAC CCGCCTGCGT TATCGTTAAA CACGCTAACC CATGTGGTGT GGCCTTAGGT AAAGACTTGC TCGATGCCTA TAACCGCGCT TATCAAACTG ACCCAACCTC AGCCTTCGGT GGCATTATTG CTTTCAACGG CGAGTTAGAT GCCGCGACGG CGAGTGCTAT CGTTGAGCGT CAATTCGTTG AAGTGATTAT CGCCCCAAGC GTCAGCCAAG CGGCGCGCGA TGTGGTGGCG AAAAAGACCA ACGTGCGTTT ATTGGAATGT GGTCAGTGGA ACACTAAGAC CCAAACCTTA GACTACAAAC GCGTTAACGG CGGCTTGTTA GTACAAGATC GCGACCAAGG CATGGTCGGC TTAGAAGACA TCAAAGTGGT TTCTAAACGT CAACCAACTG CAAGCGAACT GAAAGACTTA ATGTTCTGCT GGAAAGTGGC GAAATTCGTT AAATCTAACG CCATCGTTTA TGCCAAAGAC GGCATGACTA TCGGTGTCGG CGCAGGCCAA ATGAGCCGCG TTTACAGCGC TAAAATCGCT GGCATCAAGG CCGCCGATGA AGGCTTAGAA GTAGTGAACT CTGTGATGGC ATCCGATGCT TTCTTCCCCT TCCGTGACGG TATCGATGCC GCAGCGGCTG CGGGCATTAG CTGCATCATC CAACCGGGTG GCTCAATGCG CGATGCTGAA ATCATCGCTG CAGCAGACGA GCACGGCATG GCCATGGTGA TGACGGGCAT GCGCCACTTC CGTCACTAA
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Protein sequence | MTAANNARPI RRALLSVSDK TGILEFAKAL HAQGVELLST GGTARLLADN GVPVIEVSDY TGHPEIMDGR VKTLHPKVHG GILARRGLDE SVMADNNINA IDLVAVNLYP FAETVAKAGC TLEDAIENID IGGPTMVRAA AKNHKDVTIV VNAADYSRVL AEMTANNGST THATRFDLAI AAFEHTAGYD GMIANYFGTM VPAHSTDECF ADSKFPRTFN TQLVKKQDLR YGENSHQAAA FYVDTKIDEA SVATAIQLQG KALSYNNIAD TDAALECVKE FLEPACVIVK HANPCGVALG KDLLDAYNRA YQTDPTSAFG GIIAFNGELD AATASAIVER QFVEVIIAPS VSQAARDVVA KKTNVRLLEC GQWNTKTQTL DYKRVNGGLL VQDRDQGMVG LEDIKVVSKR QPTASELKDL MFCWKVAKFV KSNAIVYAKD GMTIGVGAGQ MSRVYSAKIA GIKAADEGLE VVNSVMASDA FFPFRDGIDA AAAAGISCII QPGGSMRDAE IIAAADEHGM AMVMTGMRHF RH
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