Gene Shew185_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3907 
Symbol 
ID5371399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4632215 
End bp4633615 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content48% 
IMG OID640832168 
Productanion transporter 
Protein accessionYP_001368094 
Protein GI153002413 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCAA CAGATTCAAG CACTGTTCCA CCTAACAAAG CTCCGGTCAG CGAGGGGCTC 
GATAAAAAGA AAATGCTGAT CCTAGCGGCG GATATTGTGC TGTTATTTGC ACTCTATTAC
GGCTTACCTT TCGAACAAGG GGTGAACACG GGTCTGGCGA TTCTGGTTTT CGCTGGCATT
CTTTGGTTGA CCGAAGCAAT CCACATCAGT ATCACTGCGA TTCTCGTGCC TATACTTGCC
GTATTCTTTG GGGTGTTTGA AACCAAGGAA GCAATGAGTA GCTTTGCTAA TCCCATCATT
TATTTATTCT TCGGTGGCTT CGTTCTGGCT GCGGCCTTGC ACCATCAAAA GATTGATACC
TTAATCGCAC AAAAGTTGTT GTTAGCCTCT AAGGGCAAAC TCAGTATCGC TTGCTTTATG
CTGTTCGGGG TAACGGCGCT GCTCTCAATG TGGATCAGTA ATACCGCCAC CACGGCGATG
ATGTTGCCAT TGGCTCTCGG GATTTTGCAG CAACTAGATC GTGACAAATA TCACAGCACG
TATGTTTTCT TACTGCTCGG GATTGCCTAT TCGGCCAACA TCGGCGGTAT CGGTACTTTA
GTGGGCAGCC CACCGAATGC GATTGCTGCG GCGCAAGTTG GCTTGAGTTT TAGTGACTGG
CTCAAGTTTG GTATTCCGAC CGTTATCCTC ATGTTGCCGT TAATGTTGAT TGCCTTGTAT
TGGTATTTTA AGCCGGATCT TTCTGCCAAG TTCGATGTGC AAGTTGAAGC GCAGAAGCTG
ACGTTCCAAG GTAAATTCAC CCTGCTTATC TTCCTCGCGA CAGTATGTTG CTGGATTTTC
AGTGTGCCAT TAGCTAAAGC ATTAGGTGGC ATTACTCAGT TCGATACCAT AGTAGCGTTA
GGCGCGGTTG TTTTGCTCGC GGGCTTAGGC TTAGTCGGTT GGAAGAAGAT TGAATCGACC
ACAGATTGGG GTGTACTAAT ACTGTTTGGC GGCGGTTTAA CGCTAAGCGC AGTGTTGAAA
ACCACAGGTA CTAGTGTGTT TTTAGCCCAC TGGATGACAG ATATTTTCGG CAGTACGCAC
ATGTCGTTGT TCGTCTTTGC AGTGATTGCC TTTGTGGTGA TGCTGACCGA GTTTGCCAGT
AACACCGCCA GTGCCGCACT GTTAGTGCCT GTATTTGCTG CAATTGCCGA GGCATTAGGC
GTATCGCCTG TGATGTTATC TGTGCTGATT GGTATTGCCG CATCCTGCGC CTTTATGCTG
CCAGTGGCGA CGCCGCCCAA TGCGATCGTT TATGGTTCTG GCCATATCAA GCAATCGGAA
ATGGTGCGAG TAGGTATGAT CATCAACTTT ATCAGCATGA TAGTGCTAGG CATTATCGCC
CATGTTTTTT GGGATATCTG A
 
Protein sequence
MSSTDSSTVP PNKAPVSEGL DKKKMLILAA DIVLLFALYY GLPFEQGVNT GLAILVFAGI 
LWLTEAIHIS ITAILVPILA VFFGVFETKE AMSSFANPII YLFFGGFVLA AALHHQKIDT
LIAQKLLLAS KGKLSIACFM LFGVTALLSM WISNTATTAM MLPLALGILQ QLDRDKYHST
YVFLLLGIAY SANIGGIGTL VGSPPNAIAA AQVGLSFSDW LKFGIPTVIL MLPLMLIALY
WYFKPDLSAK FDVQVEAQKL TFQGKFTLLI FLATVCCWIF SVPLAKALGG ITQFDTIVAL
GAVVLLAGLG LVGWKKIEST TDWGVLILFG GGLTLSAVLK TTGTSVFLAH WMTDIFGSTH
MSLFVFAVIA FVVMLTEFAS NTASAALLVP VFAAIAEALG VSPVMLSVLI GIAASCAFML
PVATPPNAIV YGSGHIKQSE MVRVGMIINF ISMIVLGIIA HVFWDI