Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3904 |
Symbol | |
ID | 5371574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4630010 |
End bp | 4630993 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640832165 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_001368091 |
Protein GI | 153002410 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCATCGG ATACGGCAGC AGAACACATC AAGCAACTTC AGGCTGAAAT TGCTCAGCTC AAACGCGAAA ACGCCCAGTT AACGGCGTTG AATCGTCGTG CCGAAGAAAA ACTGTTTGCT GCCCTCGATG GCAATGGCTT GTGCCTGTGG GAACAGCATA TTCCAAGTGG GAATTTAACG ATATTCAATA TGCGCTGGGG CGAAATGCTC GGTTTTAGTC CTGAAGAATT AGCCGCCCAC GTTGATATCT GGAAAAGTAA GTTACACCCA GAAGATAAAG CATGGGTGAT AAAAGCCTTT GAAGATCATG TCAGTGGTAA GGCCGATTAC TATCAGGCAG TACACAGAAT GTTGCATAAA GATGGTAGCG TTACTTGGGT GTCTGACCGT GGCCGTATCG TTGAGCGTTT TGCCGATGGC ACGCCGCTGC GGATGATGGG CAGCCATATC GATATCACCC AAGAAAAACG CTACGAACTG GATCTGGCAC TGTTAGCTCA CAGCGATCCC CTCACCAACT TAATGAATCG CCAAGCCATA GCCAAAGCGT TCGATGAGTG TTTGCAACCC GAGATGCGCG GCGCATTATT CTTTATCGAT CTGGATGGTT TTAAAGCCTT AAATGATCGT CACGGCCATA AGTTTGGCGA CAATTTATTG GTGCATGTGG CGCATACATT AGTGTCTCAT TCGGGTGAGT TAGCGAAGAT CGCTCGGCTA GGTGGCGATG AGTTTGTGAT CATACTGCCG TCCTCGGATA TTGAATCTTT AGCTATGCTC GCACAATCCT TGCTCGATGT TTATCGACAG GGCTTTTTGC TTGAAGGTTG TGACGTGGAG ATAGGCCTGA GTATCGGTAT CGATATATTT AGCTATGGTG ATAGTTTTGC CAAAAGCTGC GATCGCGCGG ATGCTGCTAT GTACCGCGTG AAACACCAAG GTAAAAATGG CTACCGCTTT TACCAGCAAG CTGATGATTG CTAA
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Protein sequence | MASDTAAEHI KQLQAEIAQL KRENAQLTAL NRRAEEKLFA ALDGNGLCLW EQHIPSGNLT IFNMRWGEML GFSPEELAAH VDIWKSKLHP EDKAWVIKAF EDHVSGKADY YQAVHRMLHK DGSVTWVSDR GRIVERFADG TPLRMMGSHI DITQEKRYEL DLALLAHSDP LTNLMNRQAI AKAFDECLQP EMRGALFFID LDGFKALNDR HGHKFGDNLL VHVAHTLVSH SGELAKIARL GGDEFVIILP SSDIESLAML AQSLLDVYRQ GFLLEGCDVE IGLSIGIDIF SYGDSFAKSC DRADAAMYRV KHQGKNGYRF YQQADDC
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