| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3884 |
|---|
| Symbol | |
|---|
| ID | 5372394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 4607276 |
|---|
| End bp | 4609336 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640832145 |
|---|
| Product | peptidase S9 prolyl oligopeptidase |
|---|
| Protein accession | YP_001368071 |
|---|
| Protein GI | 153002390 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.913505 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTAT CATCCTTCAC AAGCCAGTTA TGCAGTGCTG CTATTGCCGC TATGCTACTC
GCAAGCTGTT CAACCTCAAC CACTGAGCAC AAAGCCAACA CGAATAGGCT TAACAGCCAG
CAAGCCCAAG TGCCGCTCAT TCCCATCGAA GATTTTTTCA ATGAGCAAAA TATTCACCAT
TTAAAAATGT CCGCCGACGG TAAATGGTTA GCCTTCACAA AGGAATACCA AGGTGCGAGC
AATATTTATG TAATGGCAGA TAAAAGTGAT CTTGCAAGTG CGACACTCTT AACTCAGTCC
ATTGAACCCA TTAAAGAATT TGAATGGTCA TCAAACAGTA ACGAACTCTT TTTTATGAAA
GATAAAGGGG GAAATGAAAA CACCCAAATT TTTAAACTCA GCTTTGAAAC TCCCCAAGGC
AAAATAGAGC CAAAAGAGCA GCAACTGACG CACAATGACA AGGTGAAATA CAGCGTCATG
GAACAGCCCA AGGATAACCC TGAGCAGTTG GTTGTGATGG CGAACCACGA TGAATCGAGT
CGGATGGATA TCTATTGGCT CAACACCCAT GATGGCAAGC TAACGCCTAT TTTTGAAAAC
AACTTAAACT TAGTGCAAAT GAAGTTTAAC AAGCAAGGGC ATCCCGTTAT TGGCAGTAGC
ACGAATCTAG ATAACAGCTA TAGCCTCTAC ACACTCATAG ATGGCACTTG GCGTAAAATA
ATCCACACAG CTAAGGGTGA AAGCATTGAT ATCTTAAAAG TAAACGATGC AAAAAAACTC
GCCTATATCA GTGCCAACAT CGGTGAACGG GATAAACAAC AACTGCTCAA AGTTGATCTT
ATGACGGGAA AATATGAAAC CTTACATAAA GATCCTAAAG ATGAAGCGGA TGTTTATCAG
GTATTGTTTA ACGATGCTGG TGAGCCTTTA GCCATTTCCT ATTACGGCGG TCGCTTAAGA
ACCTATGCAC TTGATACTGA GTTTGCTAAG CACTGGGATG TGATCAATAG GCATTTTAAT
CAAGATGTTG AAATAACAAT TACCGAACGT AACGAGAAAA ACAATCTCTG GCAGATCAAC
GTCGCGAGCG ATAGGGCATC GAGCTTAGAT TACCAATACA ATGCCATTAA TGGTGATATC
CACTTACTCG CAGATATTCC TCCAAGCATA CAACCAGAAC TGCTATCACC AAGACAATCC
CTAGTCTATA CCGCAAGGGA TGGTGTAAAA ATTCAGGCTT ATTTGACATT ACCAAAGGGA
AACCAGCGCA ATTTACCCAC CATCATTCTG CCCCATGGCG GCCCTTGGGC TCGGGACTAC
TGGGCGTTAG ACTCTGGTTA CTTCCATGCG ATTGCTCAGT TCTATGCCAA CCGTGGTTAT
GCCGTGTTAC AGCCAAACTT TCGTGCATCG ACAGGATTTG GCAAACACTT CCTCAACTTA
GGCAATAACA ATTGGGGCAC TGGCAGTATG CAAGATGACC TGACTGATGG TGCAAATTAC
TTGGTCGAAC AAGGGATTGC GGATAAAAAT CGCTTGGGGA TCTTTGGCGC ATCTTACGGT
GGTTATGCGG CTTTATCCGG CGCGACTTTT ACCCCAGATC TTTACCAAGC CGTGATCGCC
TATGTGGGGC CGTCAAGCTT AGTTACGCTA ATGGCGTCTT TCCCCGATTA CTGGCGCCCC
TATTTAGGTC AATGGTTTGA ATCAGTAGGA GACCCGTTAA TTCCTGAACA AAAACAAGAT
ATGGAGAACC GCTCCCCAAT TAATTTTGTC GATAACATAA AAGCACCGCT GATGCTTATC
CAAGGAGCGA ATGATCCGCG AGTGACTCAA GTTGAATCAG ATAATATTGC GAAAAAGATG
TACCAAAAAT CGTTACCCGT TGAATACTTA CTCGCCAAAG ATGAAGGTCA TGGATTTATC
AAACGTGCGA ACAAGCTCGC CGCGATAATT GCGACTGGAC GTTTCTTTGG TAAGTACTTA
GGCGGAAAAG TGGATAATAA TGTCAATCCA GCTTTGCTTG AACATCTTAA TAGCTTAAAT
GTTGAGATAG AAAAACTGTA A
|
|---|
| Protein sequence | MRLSSFTSQL CSAAIAAMLL ASCSTSTTEH KANTNRLNSQ QAQVPLIPIE DFFNEQNIHH
LKMSADGKWL AFTKEYQGAS NIYVMADKSD LASATLLTQS IEPIKEFEWS SNSNELFFMK
DKGGNENTQI FKLSFETPQG KIEPKEQQLT HNDKVKYSVM EQPKDNPEQL VVMANHDESS
RMDIYWLNTH DGKLTPIFEN NLNLVQMKFN KQGHPVIGSS TNLDNSYSLY TLIDGTWRKI
IHTAKGESID ILKVNDAKKL AYISANIGER DKQQLLKVDL MTGKYETLHK DPKDEADVYQ
VLFNDAGEPL AISYYGGRLR TYALDTEFAK HWDVINRHFN QDVEITITER NEKNNLWQIN
VASDRASSLD YQYNAINGDI HLLADIPPSI QPELLSPRQS LVYTARDGVK IQAYLTLPKG
NQRNLPTIIL PHGGPWARDY WALDSGYFHA IAQFYANRGY AVLQPNFRAS TGFGKHFLNL
GNNNWGTGSM QDDLTDGANY LVEQGIADKN RLGIFGASYG GYAALSGATF TPDLYQAVIA
YVGPSSLVTL MASFPDYWRP YLGQWFESVG DPLIPEQKQD MENRSPINFV DNIKAPLMLI
QGANDPRVTQ VESDNIAKKM YQKSLPVEYL LAKDEGHGFI KRANKLAAII ATGRFFGKYL
GGKVDNNVNP ALLEHLNSLN VEIEKL
|
|---|
| |