Gene Shew185_3877 details

Gene Information

• Locus tag: Shew185_3877
• ID: 5371842
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 4599792
• End bp: 4601921
• Gene Length: 2130 bp
• Protein Length: 709 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640832138
• Product: cytochrome c, putative
• Protein accession: YP_001368064
• Protein GI: 153002383

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.845575
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGAT GGAAAATCAA AACAGCCTTA GGCGTGCTGT TTTGTTTAGG TTCTGCCGTA 
AGCGCTACCA CAATCGCATC CGATGCTAAA TCGGATGGTA AAGTGGTCCC TGGAGTGGGT 
AATAAACAGC AATCCCACTA TACTCAAGAT ATTTTGGCTA ATCCCAATTT AAATGACAAT 
TTAATGGAGA AATCCCGTGG TGTTAAAACA CTGCAGGATT ATATTGTTCA AGAGCAAGAA 
TTATTTGATT TTTTATTTGA AAATCACCCC GTTTTTAAAT ATGACGCGGA AGGTCGATTA 
AAGGGCACTT ATAAAGTCAG TGACCGCGGT GAAGAATATT TACACGGTGG TGACAGTGTT 
GCTTACAGTA AACACAGTAA AGAAGTGAAC TCAACTGATG GCACCGCTGT ACGTTATAGT 
GCCTATAACG ATGGTCAACG TCCAAAAGCA CTGCAATATC GTTTAGGGGC AAAATCGATT 
TTAGATTTCC CTAACAAGTT TGTTGGCCCC GAAAAATGCG GTGAGTGTCA TGGTCCGCAA 
TACGAAAAAT GGAGACGTTC ACGTCACTCT AAGACGATTC GCTTCCCTGG CGAACATCCA 
GAAGTCGATA ACGACCTGAA AAAAACCATG TATACCACCA AAGATACCTC GATTCTGCCA 
TCGGGTATTA CGCCAGACGC TATCTATGCA ACTGTGGGGA CGCCACGTAC CAAATATGGT 
TTTATCGACG CCTATCTGGT GCGCGGTACT TACCACGTGA AAGACGGTCT GCTGAAAGAT 
GGCACTGGTA CTATGGTCGC CGGTGGTAAC CAATTCTCCC GCGGTTGGGC TGAGTGGTTA 
ACCCCTGAAA TGGCTGCAAA AATTAACAAA GCTATCCCAA GTTTCCCTGT CAAAATGGAA 
GATTTTGGTA CCAGCGGTTC ACACCAATGG GGCATGAGCT CATACGGTGC TAAGTACGAG 
AAGGAATTCC TATTCCAACC AGCTAGCTCC TATTGCGAAA TGTGCCACAG CTTTAAGTTT 
GACTTCCAAA CTAAAGATGA ATTCTTCGCT GCCTTAGGTA ACCCAAAAGA GCTGCAAAAA 
CACACGATTT CTAAAGGGAT TACCTGTGAA GAGTGTCATG GCGCAGGCGG CCACTTAGAC 
GGCGGTATTG GTGGCGGTAT GCCATCTAAC TGTGAACGTT GTCACCAACG CTTCAATTTT 
GTTGAAGAGC TAGCTGAAAC GCCACAGGGT AAAGAGAAAC TGGAATATGC CTTCAACGTG 
AAGATGAAAT CTTCTTGCCC ATCTTGCGGT ACTGAAGGTT CGCAAATGTT TGCCTCTGCA 
CACTATGACA AAGGCATGCG TTGTTCAACC TGTCACGATC CACACGAAGT GACTGATGGT 
GATTGGAAAT CTGGTACTAC CAAGCCAAAA ATCATCAAAG AGTGTACTGA CTGTCATACG 
GCTCAAGCCG AGATCGCCAA GAACACCAAC ACCCACAGCA ACCAAACTTG CCAAAGCTGT 
CACATGCCAA ACATGGGAAG CTGTGAAAAC TTCACTGCGA TCCAATTCCC AGATATGGCG 
GGCTTCGACA ACGTGCGTAA GTCACACATG TGGAAGATTG ATGTCGACCC ACTGCGTAAG 
ACCCTCAACC CACCTGAAGG TAAGTCGCGC GATGCGACGA CTAAGGGCTG GACTGTGGCG 
AAAGATGAAA ACGGCTACAA CTACCTCGAC TTGATGTGGA CCTGCGCCCG TACTTCAGCT 
TCAGACCACG ATGTGACCGA AAACAAAGGT TGTCATAGCC AGTTCCAATC TGAACTTGAA 
GTGGGTCTGC ACTTTGAAGA CCAGATGGAA ATCTATGGCG AAGTTCAAAA GTGGCAAAAA 
CCAGTTAAAG AAACTTTTGC CCTAGTAGAA CAAGCCCTTG CCCGTATCGA CAAGCTGTTA 
GAAGTCACCA AGCTGTCGGT TGAAGACAAG ACGCAAGTGT TGATGTTGAC CGACAAAGCC 
CAAGATGTTG TTCGCCTGAT TAAGGCTGAC GGTTCATGGG GTGCGCACGG CCCAAGTTAC 
TCACTGAAAC GTCTTGATGC TGCCTTAACC TATGTGACTC AAGCCCAAGC CATTATCGAT 
GGTAAAGGTC TGAGCGCACA GAAAATGTAG 

 

Protein sequence

MKRWKIKTAL GVLFCLGSAV SATTIASDAK SDGKVVPGVG NKQQSHYTQD ILANPNLNDN 
LMEKSRGVKT LQDYIVQEQE LFDFLFENHP VFKYDAEGRL KGTYKVSDRG EEYLHGGDSV 
AYSKHSKEVN STDGTAVRYS AYNDGQRPKA LQYRLGAKSI LDFPNKFVGP EKCGECHGPQ 
YEKWRRSRHS KTIRFPGEHP EVDNDLKKTM YTTKDTSILP SGITPDAIYA TVGTPRTKYG 
FIDAYLVRGT YHVKDGLLKD GTGTMVAGGN QFSRGWAEWL TPEMAAKINK AIPSFPVKME 
DFGTSGSHQW GMSSYGAKYE KEFLFQPASS YCEMCHSFKF DFQTKDEFFA ALGNPKELQK 
HTISKGITCE ECHGAGGHLD GGIGGGMPSN CERCHQRFNF VEELAETPQG KEKLEYAFNV 
KMKSSCPSCG TEGSQMFASA HYDKGMRCST CHDPHEVTDG DWKSGTTKPK IIKECTDCHT 
AQAEIAKNTN THSNQTCQSC HMPNMGSCEN FTAIQFPDMA GFDNVRKSHM WKIDVDPLRK 
TLNPPEGKSR DATTKGWTVA KDENGYNYLD LMWTCARTSA SDHDVTENKG CHSQFQSELE 
VGLHFEDQME IYGEVQKWQK PVKETFALVE QALARIDKLL EVTKLSVEDK TQVLMLTDKA 
QDVVRLIKAD GSWGAHGPSY SLKRLDAALT YVTQAQAIID GKGLSAQKM