Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3847 |
Symbol | |
ID | 5373514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4564068 |
End bp | 4567274 |
Gene Length | 3207 bp |
Protein Length | 1068 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640832108 |
Product | CzcA family heavy metal efflux protein |
Protein accession | YP_001368034 |
Protein GI | 153002353 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCAAA AAGTGATCGA AGCCGCGATT AAAAATCGGC TGTTAGTGGT GTTGGCCTTG CTCGCCATGA TAGTGGCAAG CGTGGTGATG CTGCCTAAAT TGAATCTCGA TGCCTTTCCC GATGTGACTA ACGTGCAAGT GACTATCAAT ACTGCGGCCG AAGGGTTAGC CGCAGAAGAG GTGGAAAAAC TTATCAGTTA TCCGGTGGAA TCGGCCATGT ACGCCTTGCC AGCTGTGACT GAGGTGCGCT CGTTATCGCG CACTGGCTTG TCGATTGTGA CTGTGGTATT TGCCGAAGGG ACGGATATTT ACTTCGCCCG TCAGCAAGTG TTTGAGCAGT TGCAAGCGGC GCGGGAGATG ATCCCAAGCG GCGTCGGTGT GCCGGAAATC GGCCCGAATA CTTCGGGATT AGGGCAGATT TATCAGTATA TTCTGCGCGC CGAACCTAAC TCAGGTATCG ATGCCGCCGA GCTGCGCAGT TTGAATGATT ATCTTGTGAA ACTCATCATG ATGCCCGTCG GCGGCGTGAC GGAAGTCTTG TCTTTTGGTG GCGATGTGCG CCAATACCAA GTGCAGGTCG ACCCGAATAA ACTGCGCGCC TATGGCTTGT CGATGGCGCA AGTTACCGAG GCATTAGAGA GCAATAACCG CAACGCTGGC GGTTGGTTTA TGGACCAAGG CCAAGAGCAA CTTGTGGTGC GCGGCTACGG CATGTTGCCT GCAGGAGCAG AAGGCTTAGC GGCGATCGCA CAGATCCCGC TTACGGAGGA TAAAGGCACG CCCGTGCGGG TGGGCGATAT CGCTCAGGTG GATTTTGGCA GTGAAATTCG TGTCGGCGCT GTGACTATGA CTCGCCGCGA TGAGGCTGGC AACGTACAAA ACCTCGGCGA AGTGGTGGCG GGGGTAGTGC TTAAACGCAT GGGCGCCAAC ACCAAAGCGA CTATTGATGA TATCGGCGCG CGGGTGAGTC TTATCGAGCA GGCCTTGCCC GATGGCGTGT CTTTTGAAGT GTTTTACGAT CAAGCCGAAC TGGTCGATAA GGCCGTGACC ACAGTGCGCG ATGCGTTGTT AATGGCCTTT GTGTTTATCG TGGTGATCTT GGCGCTGTTC CTCGTCAATA TCCGCGCAAC CTTGCTGGTG CTCTTGTCTA TTCCTGTGTC TATCGGGCTC GCGCTCATGG TGATGTCCTA CTATGGATTG TCGGCAAACC TGATGTCGCT GGGCGGTTTA GCCGTGGCGA TTGGTATGTT AGTCGATGGT TCCGTGGTTA TGGTAGAGAA CATTTTCAAA CACTTAACTC AGCCGGATCG TCGACATTTG CTGGAGGCGA GAACGCGCGC CGATGGTGAG GCAGACCCAT ATCATAGCGA TGAGGACGGT GGTCAGCAGG CCAATATGGC TGTGCGCATC ATGCTCGCGG CCAAAGAGGT GTGTAGTCCA ATCTTCTTCG CGACGGCGAT TATCATAGTG GTATTTGCGC CACTGTTTGC CCTCGAAGGC GTTGAAGGCA AGCTGTTCCA GCCGATGGCG GTCAGTATCA TTCTGGCAAT GATATCAGCG CTGCTGGTGG CCTTGATTGC CGTGCCAGCC CTTGCTGTGT ATTTGTTCAA GCGGGGTGTG GTGCTCAAAC AAAGCGTGGT CTTAGCGCCG CTGGATGCCG CTTATCGCAA GCTACTGACG GCAACACTTG CTAGGCCAAA GGTAGTGATG CTCAGTGCCT TATTGATGTT TGCTTTAAGT TTATTGTTAC TGCCAAGGCT TGGCACTGAA TTTGTGCCTG AGCTGGAGGA AGGCACGATT AACCTCAGGG TCACGCTGGC ACCAACCGCG AGTTTGGGCA CGTCTTTGGC AGTCGCGCCC AAACTTGAAG CTATCTTGCT GGCCTTTCCC GAGGTGGAAT ATGCCCTGAG CCGCATTGGT GCGCCTGAGC TTGGCGGCGA TCCTGAGCCT GTGAGTAATA TCGAGGTTTA TATTGGACTT AAGCCAATAT CTGAATGGCA ATCGGCAAGT TCGCGCTTAG AGTTACAACG TTTGATGGAG GAAAAACTCA GTGTGTTCCC CGGACTCTTG CTGACTTTCT CGCAACCGAT TGCGACTCGG GTAGATGAAT TACTCTCGGG GGTAAAAGCC CAGTTAGCGA TCAAAATCTT CGGCCCAGAT TTAGCGGTAT TGTCTGAGAA AGGCCAAGCG CTCACCGATC TTGTCGCGAA AATTCCCGGT GCCGTCGATG TGTCATTAGA GCAAGTGAGT GGAGAAGCGC AATTGGTTGT GCGGCCCAAA CGCGAGTTAT TGGCGCGCTA CGGCATTAGT GTCGATCAAG TGATGAGCCT TGTCAGCCAA GGCATTGGCG GCGCGAGTGC AGGTCAAGTA ATTGACGGCA ACGCCAGATA CGACATCAAT GTGCGCCTCG CGGCCGAGTT TCGCACTAGC CCAGATGCGA TTAAGGACTT GTTACTCAGC GGCACGAATG GCGCCACTGT GCGCTTAGGC GAAGTCGCCA GCGTCGAAGT AGAAATGGCG CCGCCGAATA TTCGCCGTGA CGACGTGCAG CGCCGAGTGG TGGTGCAGGC CAACGTGGCG GGGCGCGATA TGGGCTCTGT GGTGAAAGAC ATTTATGCTT TAGTGCCTCA GGCTGATTTA CCCGCGGGAT ATACAGTGAT CATTGGCGGC CAGTATGAGA ATCAGCAGCG GGCGCAGCAA AAGCTGATGC TAGTGGTGCC GATCTCTATC GCCTTGATTG CCTTGCTGTT GTACTTCTCC TTTGGTTCAT TCAAGCAAGT GTTGCTCATT ATGGCGAACG TACCCTTAGC CTTGATTGGC GGCATAGTGG CCCTGTATGT CAGTGGCACT TATTTGTCAG TGCCTAGCTC CATTGGCTTT ATCACCTTAT TTGGGGTAGC CGTGCTCAAC GGTGTGGTGT TGGTGGATTC GATTAATCAG CGCAGGCAAA GCGGCGAAGC ACTCTATGAT TGTGTTTATG AGGGCACGGT TGGGCGTTTG CGCCCCGTGT TGATGACGGC ATTGACCTCG GCCTTAGGCT TGATCCCGAT CCTATTGTCA TCGGGGGTTG GCAGTGAAAT CCAAAAGCCG CTGGCAGTGG TGATAATTGG TGGCTTGTTC AGCTCCACGG CGCTGACCTT GCTAGTGTTG CCGACCTTAT ATCGCTGGTT ATATCGTGGC GACAAGCGCA TCGATGAGCT TGATTAA
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Protein sequence | MLQKVIEAAI KNRLLVVLAL LAMIVASVVM LPKLNLDAFP DVTNVQVTIN TAAEGLAAEE VEKLISYPVE SAMYALPAVT EVRSLSRTGL SIVTVVFAEG TDIYFARQQV FEQLQAAREM IPSGVGVPEI GPNTSGLGQI YQYILRAEPN SGIDAAELRS LNDYLVKLIM MPVGGVTEVL SFGGDVRQYQ VQVDPNKLRA YGLSMAQVTE ALESNNRNAG GWFMDQGQEQ LVVRGYGMLP AGAEGLAAIA QIPLTEDKGT PVRVGDIAQV DFGSEIRVGA VTMTRRDEAG NVQNLGEVVA GVVLKRMGAN TKATIDDIGA RVSLIEQALP DGVSFEVFYD QAELVDKAVT TVRDALLMAF VFIVVILALF LVNIRATLLV LLSIPVSIGL ALMVMSYYGL SANLMSLGGL AVAIGMLVDG SVVMVENIFK HLTQPDRRHL LEARTRADGE ADPYHSDEDG GQQANMAVRI MLAAKEVCSP IFFATAIIIV VFAPLFALEG VEGKLFQPMA VSIILAMISA LLVALIAVPA LAVYLFKRGV VLKQSVVLAP LDAAYRKLLT ATLARPKVVM LSALLMFALS LLLLPRLGTE FVPELEEGTI NLRVTLAPTA SLGTSLAVAP KLEAILLAFP EVEYALSRIG APELGGDPEP VSNIEVYIGL KPISEWQSAS SRLELQRLME EKLSVFPGLL LTFSQPIATR VDELLSGVKA QLAIKIFGPD LAVLSEKGQA LTDLVAKIPG AVDVSLEQVS GEAQLVVRPK RELLARYGIS VDQVMSLVSQ GIGGASAGQV IDGNARYDIN VRLAAEFRTS PDAIKDLLLS GTNGATVRLG EVASVEVEMA PPNIRRDDVQ RRVVVQANVA GRDMGSVVKD IYALVPQADL PAGYTVIIGG QYENQQRAQQ KLMLVVPISI ALIALLLYFS FGSFKQVLLI MANVPLALIG GIVALYVSGT YLSVPSSIGF ITLFGVAVLN GVVLVDSINQ RRQSGEALYD CVYEGTVGRL RPVLMTALTS ALGLIPILLS SGVGSEIQKP LAVVIIGGLF SSTALTLLVL PTLYRWLYRG DKRIDELD
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