| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3842 |
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| Symbol | |
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| ID | 5373615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4559125 |
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| End bp | 4560753 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640832103 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001368029 |
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| Protein GI | 153002348 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAA CTGGCTCTAT TACTGCGTCT GCCGATATGG AGGCGCAGGG CATCAGTGCA
CCTAACAAGC CTAGCGATTA TGAGCGTGGC AGTCGCCGCT CATGGATCGC CGTATTTGGT
GGGTTGATCG GCGCCTTTAT GGCGATCCTC GATATTCAAA TCACCAATGC ATCGATGAAG
GAGATTCAAG GCAGTCTTGG GGCTACGCTC GAAGAAGGCA GCTGGATTTC AACCGCGTAT
CTGGTGGCTG AGATGATCGC GATCCCGCTC TCTGGCTGGC TCAGTACAGG ATTGTCGGTT
AGGCGTTATC TTTTATGGAC CACGGCTGCT TTTATCTTTG CTTCTGTGCT TTGTTCTATG
GCGTGGAACT TAGAGGCCAT GATCGCCTTT CGGGCGCTAC AGGGCTTCTT TGGTGGTGCG
CTAATTCCGC TGGCCTTTAG GCTTATCCTT GAGTTTTTAC CCGATAACAA GCGTGCCGTC
GGCATGGCGT TATTTGGCGT GACGGCGACC TTTGCGCCTT CAATCGGCCC GACCTTAGGC
GGTTGGTTGA CCGAGCAATT TAGCTGGCAT TATCTGTTTT ATATCAACGT GCCACCAGGC
TTGTTGGTGA TGGCGATGTT GGCCTACGGT TTAGAAAAGC AGTCGGTGGT TTGGGATAAA
CTGAAGAATG TCGATCTGGC GGGCATAGTC ACTATGGCGC TGGGTATGGG TTGTCTTGAA
GTGGTGCTCG AAGAAGGTAA CCGCAAGGAT TGGTTTGGCT CGGAACTCAT TCGTAATCTG
GCCATAATTG CCGTAGTCAA TCTGGTGTTG TTTGTTTGGA TCCAGTTAAG GCGTAAAGAA
CCGTTAGTAA ATTTGCGCCT GCTCGGTAAG CGTGATTTTG TGCTCTCCAC CGTGGCGTAT
TTTTTACTGG GGATGGCACT ATTCGGCGCT ATCTATTTGA TCCCGCTTTA TCTATCGCAA
GTCCATGATT ACACACCGTT AGAGATTGGT GGCGTGATTA TGTGGATGGG ATTTCCGCAG
CTATTGGTCT TGCCTTTAGT GCCAAAATTA ATGGAGCGCT TCGATAGTCG ATATCTCGCC
GCCTTTGGCT TTTTAATGTT CGCTATTAGC TATTACATGA ATAGCCAGAT GACCGCAGAT
TACGCCGGAC CGCAGATGAT TGCCTCGCAA GTGGTGCGGG CCTTAGGTCA GCCGTTTATT
TTGGTGCCTA TTGGTATGCT CGCGACTATG CATTTGAAAC CCCATGAAAA TGCTTCGGCG
TCGACGGTAT TAAACGTAAT GCGTAACTTA GGCGGCGCCT TTGGTATTGC ACTGGTTGCG
ACCCTATCAG ACACGCTGGC GCGCGCGCAT TTGGCCCATA TTAAGGAATC CTTACCCGCA
GTGAGCACGC AAGCGCAGGA CTATTTAGCC CAAAGCGCAA GCATGTTGCA GGCGGGTGGT
TCAGATCCCT ATACCGCCGC CGCGCAGGCG AAAGCTTTGC TGGGCAAAAC CATGAGTCAG
CAAGCCTATA TTCAGGCCTA TAACGATGTG TTTTACATCA TGGGCGCTCT GCTACTTATC
GCTGTATTTG CCGTGCTGTT GATCCGTAAA CCGACTGGGC CTGTGGCCCA CGATGCCATG
GTCGAGTAA
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| Protein sequence | MSATGSITAS ADMEAQGISA PNKPSDYERG SRRSWIAVFG GLIGAFMAIL DIQITNASMK
EIQGSLGATL EEGSWISTAY LVAEMIAIPL SGWLSTGLSV RRYLLWTTAA FIFASVLCSM
AWNLEAMIAF RALQGFFGGA LIPLAFRLIL EFLPDNKRAV GMALFGVTAT FAPSIGPTLG
GWLTEQFSWH YLFYINVPPG LLVMAMLAYG LEKQSVVWDK LKNVDLAGIV TMALGMGCLE
VVLEEGNRKD WFGSELIRNL AIIAVVNLVL FVWIQLRRKE PLVNLRLLGK RDFVLSTVAY
FLLGMALFGA IYLIPLYLSQ VHDYTPLEIG GVIMWMGFPQ LLVLPLVPKL MERFDSRYLA
AFGFLMFAIS YYMNSQMTAD YAGPQMIASQ VVRALGQPFI LVPIGMLATM HLKPHENASA
STVLNVMRNL GGAFGIALVA TLSDTLARAH LAHIKESLPA VSTQAQDYLA QSASMLQAGG
SDPYTAAAQA KALLGKTMSQ QAYIQAYNDV FYIMGALLLI AVFAVLLIRK PTGPVAHDAM
VE
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