Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3760 |
Symbol | sspA |
ID | 5370958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4469118 |
End bp | 4469747 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640832017 |
Product | stringent starvation protein A |
Protein accession | YP_001367947 |
Protein GI | 153002266 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000134387 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTTG CTGCCAACAA ACGCTCTATC ATGACACTGT TTTCAGGTGC TGATGATCTG TATAGCCATC AAGTACGTAT CGTGTTAGCT GAGAAAGGGG TTACTGTTGA TGTTTTACAG GTCGACCCTA ACGAAATGCC TGAGGATTTG CTCGAAGTAA ATCCATATAA CTCAGTGCCA ACTTTGGTAG ATCGTGAACT CGTTTTATAC GAATCACGCA TTATCATGGA ATATTTGGAT GAGCGTTTTC CTCATCCGCC TTTGATGCCA GTTTATCCAG TATCTCGCGG CCAAAGCCGT TTGATGATGC ACCGCATAGA TACAGACTGG TATTCGCTAG TTGACCGTAT CCGTAAGGGT GATCGTGTTG AAGCCGCTCG TAAAGAGCTG ACTGAAAGCT TGATCGCTAT TGCGCCTATC TTCGGTGAAG TGCCTTACTT CATGAGCGAA GAATTTGGTC TAGCGGATTG CTACCTTGGC CCATTGTTAT GGCGCTTACC TGTGTTAGGT ATTGAGCTAG ATAGCCGTGT AGCTAAAGAT ATCAAAGCGT ACATGACACG TATTTTTGAG CGTGAATCGT TTAAAGCTTC TCTAACTGAA GCTGAACGCG AAATGCGCAT GGGTATGTAA
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Protein sequence | MAVAANKRSI MTLFSGADDL YSHQVRIVLA EKGVTVDVLQ VDPNEMPEDL LEVNPYNSVP TLVDRELVLY ESRIIMEYLD ERFPHPPLMP VYPVSRGQSR LMMHRIDTDW YSLVDRIRKG DRVEAARKEL TESLIAIAPI FGEVPYFMSE EFGLADCYLG PLLWRLPVLG IELDSRVAKD IKAYMTRIFE RESFKASLTE AEREMRMGM
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