| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3737 |
|---|
| Symbol | |
|---|
| ID | 5371375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 4441664 |
|---|
| End bp | 4442968 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640831994 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001367924 |
|---|
| Protein GI | 153002243 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCAATT CTTCATTACG TAAAAGCCTA GAAGTGAGCG AAAACAAGCG CCAAGAAGCG
GAGTCGGTCA TAGACGCCAT TAAGCAAAGT ATTGCCACGG TAGAATTTAC GCCTGAAGGA
AAAGTGCTCG ATGCGAATGC CTTGTTTTTA AAAGTAGTCG GTTATTCACT TACTGAAGTT
GTTGGCCAAC ACCATAAGCT GTTTTGCTCA GCGACCTATG CTAATTCTCC TGCCTACCAA
CAATTTTGGA GTAATTTAAA AGCCGGTCAT CCACAGGAGG GACATTTCGC GCGAGTGAAT
AAAAATGGCC AAGAAATCTG GCTAAGAGCG ACTTACTTTC CTGTAAAACA GGCGGGGAAA
GTCGTGAAGA TAATGAAAAC GGCTTCTGAA ATTACCCAAT ACAAGCAACA GCTTGACGAT
CAATCCGCCA TCTTTGATGC CCTAAATCGC TCCCAAGCTA TTATTGAATT TACCCCAGAT
GGCACTATCC TGAAGGCAAA TGCCAACTTT TTAAAAACAA TGGGATACAG CAAAGAACAG
ATCTTGGGTA AGCATCATAG AATTTTCTGT TTCGATGAAT TTTATCGACA AAATCCTCAC
TTTTGGGACG AGCTTAAGCA AGGTCGCTAT AGCAAAGGGC TATTTGAGCG CAAAAATGCC
TATGGCGACT CAATTTGGCT GGAGGCGGCT TACAATCCCA TTATGGATGA GCATGGAAAG
GTCGTTAAAG TTGTTAAGTT CGCCAGTGAT ATAAGCAAGC GGATCGAGCA AAGCCACGCT
GTGCGTGAAG CCGCAAATAT TGCGCTCACC ACATCGCAAC GCACCGTTGA GCAAGCGGAA
CAAGGCGTTA AGTTGCTTAA TGCGACCGTC AATACCTCCA ATGCCATTGC TGAGCAAACC
CATAAAACGA CTCAGGCGAT TACTCAATTG AATGAGCAAT CCCAAAGTAT TCAAGCCATA
GTCGCGACGA TTAGCTCGAT TGCCGATCAA ACCAATTTGC TGGCATTAAA TGCCGCGATT
GAGGCCGCGC GTGCAGGTGA ACAAGGCCGA GGTTTTGCGG TTGTCGCCGA TGAAGTGAGG
CAGCTCGCTT CCAGAACCAG TAAATCAACC AGTGAAATTG CCGCCGTCGT CACTAAAAAT
ACCCAGCTCA CCACAAGTGC AACAGACATG ATGAACGAAG TTGAAGGTAT CGCACAGGAA
GGGAAACAAC AGTTAGCTGA GGTAACTTTG GTGATGGGAG AAATACGCAA CGGGGCAGAA
AACGTCTCAC AAATCGTCTC ACAACTTTCA ATCAACGGTC ATTAA
|
|---|
| Protein sequence | MFNSSLRKSL EVSENKRQEA ESVIDAIKQS IATVEFTPEG KVLDANALFL KVVGYSLTEV
VGQHHKLFCS ATYANSPAYQ QFWSNLKAGH PQEGHFARVN KNGQEIWLRA TYFPVKQAGK
VVKIMKTASE ITQYKQQLDD QSAIFDALNR SQAIIEFTPD GTILKANANF LKTMGYSKEQ
ILGKHHRIFC FDEFYRQNPH FWDELKQGRY SKGLFERKNA YGDSIWLEAA YNPIMDEHGK
VVKVVKFASD ISKRIEQSHA VREAANIALT TSQRTVEQAE QGVKLLNATV NTSNAIAEQT
HKTTQAITQL NEQSQSIQAI VATISSIADQ TNLLALNAAI EAARAGEQGR GFAVVADEVR
QLASRTSKST SEIAAVVTKN TQLTTSATDM MNEVEGIAQE GKQQLAEVTL VMGEIRNGAE
NVSQIVSQLS INGH
|
|---|
| |