| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3707 |
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| Symbol | |
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| ID | 5372111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4402698 |
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| End bp | 4403948 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831965 |
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| Product | ammonium transporter |
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| Protein accession | YP_001367895 |
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| Protein GI | 153002214 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00259002 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAT TAACAAAATT AGGCGGCACA GTCACTGAAC TACGCTTTGC ACTCGATACC
TTTTACTTTT TGATTTCTGG TGCGTTAGTT ATGTGGATGG CGGCGGGATT CGCCATGTTA
GAAGCGGGTT TAGTTCGCTC TAAAAACACC ACTGAAATTT TAACTAAGAA CGTTGTGTTG
TACGCGATTG CCTGTGTGAT GTATCTGCTG GTTGGCTACA ACATCATGTA TGTGGATAAC
ACTGAAGGGG GTTGGTTGCC ATCGATTGGT ACCTTAATCG GTTCTCAATC ATCAGATGCG
AGCCATGCAT TAGAATCTGA CTTCTTCTTC CAAGTGGTGT TTGTGGCAAC GGCGATGTCA
ATTGTCTCTG GCGCTGTGGC GGAACGGATG AAGTTATGGG CTTTCCTGTT CTTCTCTGTG
GTGATGACAG CGGTTATCTA TCCAGTAGAA GGGTATTGGA CTTGGGGCCA AGGTTTTATC
TCTAAACTGG GCTTTGTGGA CTTTGCCGGT AGCGGTATTG TGCACATGAC AGGTGCGACG
GCGGCGATTG CGGGTGTGTT GTTGCTCGGT GCGCGTAAGG GTAAATATGG CCCTAACGGT
CAAGTGAATC CTATCCCTGG CTCTAATTTG CCGATGGCAA CCTTAGGTAT GTTTATTCTG
TGGATGGGCT GGTTTGGCTT CAACGGTGGC TCGCAATTAA TGGTGTCGGA TGCGGCGAAT
GCGAGCTCAG TGGCAAAAGT GTTTGTTAAT ACCAATACTG CGGCGGCGTT CGGTGCTATC
TCTGCGCTTA TCGTGTGTAA GATGATTTGG GGTAAAGCGG ATTTAACCAT GATACTCAAC
GGTATTTTGG CGGGTTTAGT GGCTATTACT GCAGATCCTC TTTCACCTTC ACTGTTAATG
GCGGGTGTGA TTGGCTTAGT TGCGGGCGGC GTGGTGGTGT TCTCGATTGT GGGCTTAGAT
CGCATTAAGA TCGACGATCC AGTGGGCGCG ATTTCAGTAC ATGGCGTGGC TGGCTTCCTT
GGGCTAATGT GTGTGCCATT ATCCAACGCT GATGCGACTA TTACTGGGCA GTTGACCGGT
GCAGCCTTCA TCTTTACTTG GGTATTCTGT TCATCCTTTG TGGTTTGGTA TGTGATTAAG
AAAACCATGG GGATCCGTGT GACAGAGGAA GAAGAATACA ATGGTATGGA TGCGTCTGAT
TGCGGTATCG ATGCCTATCC AGAGTTTGTT ACGGTTAAAA ATGCTGGCTA A
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| Protein sequence | MEELTKLGGT VTELRFALDT FYFLISGALV MWMAAGFAML EAGLVRSKNT TEILTKNVVL
YAIACVMYLL VGYNIMYVDN TEGGWLPSIG TLIGSQSSDA SHALESDFFF QVVFVATAMS
IVSGAVAERM KLWAFLFFSV VMTAVIYPVE GYWTWGQGFI SKLGFVDFAG SGIVHMTGAT
AAIAGVLLLG ARKGKYGPNG QVNPIPGSNL PMATLGMFIL WMGWFGFNGG SQLMVSDAAN
ASSVAKVFVN TNTAAAFGAI SALIVCKMIW GKADLTMILN GILAGLVAIT ADPLSPSLLM
AGVIGLVAGG VVVFSIVGLD RIKIDDPVGA ISVHGVAGFL GLMCVPLSNA DATITGQLTG
AAFIFTWVFC SSFVVWYVIK KTMGIRVTEE EEYNGMDASD CGIDAYPEFV TVKNAG
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