Gene Shew185_3566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3566 
Symbol 
ID5373811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4240904 
End bp4241677 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content47% 
IMG OID640831825 
ProductMltA-interacting MipA family protein 
Protein accessionYP_001367755 
Protein GI153002074 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.119628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TTTGCTTTGT AATCACAAGT GTTTTGATGT CGAGCCACGC GCTTGCTGAA 
AGCAATACCT ACATTCGTAA CGGTAATATC TATAGTCATC AAGATCAGTT CTTTGCTGGC
GCAGGTGTTG CTACTGGCAG CCAGTTTTAT AAGGGTCAAG ATCACCAGAC AGGTATCTAC
CTCAATGGCG GCTACCACGG TGAGGACTTC AACGCCGATC TGTCCGGTAT CAACTACCGC
TTTTTAGGCA CCAACGACAG TGCCGTTAAC TTCAGCATTT TTGTGGTTGC CAATCCTGGC
TTTGATGCCA ATGACGCCGA TATTTTAACG GGCATGAAAG ATCGCAAATT CAGTGGCGAT
CTGGGTTTAA ACGCCGACAT TCATTTAGGC ACGGGCACGT TATCAACCAA ATTCCAACAC
GATGTGACAA ATGTTTATGA TGGTTTTCAA GCTGATATCA CCTACTACCA TCCAATCAAT
CTGGGCTTTG GGGATCTGGT GCCTTATGCG GGTGTGCACT ATTTCAGTAA AGACTTCGCA
AACTACTACA CAGGTGTGAC GTCATCTGAA GCAACGGCGC AGCGCCCTGC TTATCAAGCC
GACGGCACCT TTGCCTATAA GCTGGGTTAC GCTTTGGTTA TTCCAGTCAC GAAGCATTTA
GACATTACTC AAGCTACTGG TTACTCGCAC ATTGCCGCCA ACATGGCTGA CTCTCCGCTA
ATCGACAGTA GCAACCAGTG GGTTACTACC CTTGGCGTGA GCTATAGCTT CTAA
 
Protein sequence
MKKLCFVITS VLMSSHALAE SNTYIRNGNI YSHQDQFFAG AGVATGSQFY KGQDHQTGIY 
LNGGYHGEDF NADLSGINYR FLGTNDSAVN FSIFVVANPG FDANDADILT GMKDRKFSGD
LGLNADIHLG TGTLSTKFQH DVTNVYDGFQ ADITYYHPIN LGFGDLVPYA GVHYFSKDFA
NYYTGVTSSE ATAQRPAYQA DGTFAYKLGY ALVIPVTKHL DITQATGYSH IAANMADSPL
IDSSNQWVTT LGVSYSF