Gene Shew185_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3554 
Symbol 
ID5371254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp4228113 
End bp4228673 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content48% 
IMG OID640831814 
ProductNTPase 
Protein accessionYP_001367744 
Protein GI153002063 
COG category[S] Function unknown 
COG ID[COG1986] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00258] inosine/xanthosine triphosphatase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAAA ACATTATCAA GATAAAAGTG GGTTCTAAAA ACCCAGTAAA AATCAACGCG 
GCAACCAAAG CGATGGCACA ACTGTTCCCC GACAGCATTA TAGACGCCAG CGGTATGGAT 
GCACCTTCAG GTGTTGCGGC GCAGCCAATG ACAGATAAAG ACACTCGCCA AGGGGCGATT 
AATCGGGTGC ACTACTGTCA ACAGCAGGAC CAACAAGATA CTCAAGCCGA CTACTATTTT 
GCGATGGAAG GCGGTGTCGA TTGTTTCGAC TTTGGCCCTG CCACATTCGC CTATATCGCC 
ATTGGGCATA AAGACCAACT TGCCATTGGC CGCAGCGCAA TTTTACCTCT GCCAATGCAG 
GTTTATCGGG CATTAGAAGC GGGCGAAGAA CTCGGACATG TGATGGATAG ATTGTTCAAT 
ACCGTCAATA TCAAACAAAA AGGCGGTGCC ATAGGTCTGC TAACCCACGG CCACGCGACC 
CGTGAAAGTA ATTACACCCA AGCGATTATT CTCGCCATGG CGCCGCTATT AAATCCCGAT 
ATTTACGCAC AAACTTGTTA A
 
Protein sequence
MQQNIIKIKV GSKNPVKINA ATKAMAQLFP DSIIDASGMD APSGVAAQPM TDKDTRQGAI 
NRVHYCQQQD QQDTQADYYF AMEGGVDCFD FGPATFAYIA IGHKDQLAIG RSAILPLPMQ 
VYRALEAGEE LGHVMDRLFN TVNIKQKGGA IGLLTHGHAT RESNYTQAII LAMAPLLNPD 
IYAQTC