Gene Shew185_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3529 
Symbol 
ID5370806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4195687 
End bp4198878 
Gene Length3192 bp 
Protein Length1063 aa 
Translation table11 
GC content50% 
IMG OID640831789 
Productacriflavin resistance protein 
Protein accessionYP_001367719 
Protein GI153002038 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACTC AAAAAGGGAT CTTAGCCTGG TTCGCCCGCA ACAGTGTGGC CGCGAACCTG 
TTAATGTGGG CATTACTCGT CGGCGGTTTG TTTAGCACTG TCTTGATCAA TAAAGAGGTT
TTTCCTTCTT TCGAACTCAA TTTACTGAAT ATTTCCGTCG CCTATCCAGG CGCGGCGCCG
CAGGAAATCG AAGAAGGCAT CAACATCAAG ATTGAGGAAG CCATCCAAGA TATCAACGGT
ATCAAGAAGG TCACATCAGT GGCGAGCGAA GGGGTAGGCT CGATTACGGT TGAAGTTGAA
GACGGTTACG AAGTGCAAAC CGTGCTCGAT GAAGCCAAAC TGAGATTAGA TGCGATTTCG
ACCTTCCCAG TGAACATCGA AAAACCCAAT ATCTATCAGA TTAAACCTGA AAATAACGTC
ATTTGGGTGT CTGTCTATGG CGATATGACA CTGCACGATA TGAAGGAGTT GGCTAAGTCG
GTGCGTGACG ATTTAACCCA ACTGCCAGCC GTGACCCGAG CCAAAGTCAC TGGAGTGCGC
GATTATGAAA TCGCCATCGA AGTATCAGAA GATAAGCTAC GCGAATACGG CCTAACATTT
ACACAGGTCG CGTTAGCAGT GCAAAACTCT TCCTTTGACT TACCCGGCGG TTCGATTCGC
GCCCAAGATG GCGACATCCT GCTGCGCACC AAAGGCCAAG CCTACACGGG TGATGACTTT
GCGAATATCG TCGTCACCAC TCGCCCCGAC GGTAGCCGCG TGATGTTGCC GCAAGTGGCA
ACCATCAAAG ATGATTTTGA AGAACGTTTA GAATACACCC GCTTTAACGG TAAACCGGCC
GCGATTATCG AAGTCACCAG TGTTGATGAT CAAAATGCCT TAGACATTGC CGCTCAAGTA
AAACAATACG TCGAGGATCG CCGCGCGACG CTTCCTGCCA ACGCGCAACT CGATACTTGG
GGTGATATGA CTCACTACCT CAAGGGCCGC TTAAACATGA TGATGTCGAA CATGTTTTAC
GGTGCCTTGC TGGTGTTTAT CATCCTAGCT ATGTTCCTCG ATCTTAAGTT GGCGTTTTGG
GTCATGATGG GTCTGCCGGT GTGCTTCCTC GGCACTATGC TGATCATGCC GCTCGAACCT
TTCTCGATGA CGATCAACAT GTTAACCCTG TTCGCCTTTA TCTTAGTGCT CGGGATAGTG
GTGGACGATG CGATTGTCAT CGGCGAGAGC GCCTACACAG AAGTCGAACG CCACGGTCAC
TCGGTTGACA ATGTGATCCG CGGCGCGCAA AAAGTGGCAA TGCCCGCGAC CTTCGGGGTA
TTAACCACGA TTGCGGCCTT TATTCCCATG TTAATGGTTT CTGGCCCTAT GGGAATTATC
TGGAAATCCA TCGGCATGGT GGTCATCCTC TGTTTGGCCT TCTCGCTGGT CGAATCTAAG
TTCATCCTGC CAGCGCATTT AGCGCACATG AAGTTTAAAA AGCCCGGTGC GCCAAGGGGA
TTCTTTGGTC GCCTCAAAGC CAACTTTAAC GACAGAGTGC AGCACTTTAT TCACCACAGT
TATCGCAACT TCCTCGAGCG CTGTATCAAG CAAAGATACA ACGTGGTCGC GGCCTTTATC
GGTGTGTTGG TCCTGTCTAT TGCCTTAGTC GCCAGTGGTA AAGTGCGTTG GGTATTCTTC
CCTGATATTC CCTCGGACTT CATTCAAGTT CAGCTTGAGA TGGACGAAGG CAGCTCGGAA
GAGAACACTT TGAAAGTGGT GCAGAGCATA GAAGAAGCCC TGTACAAGAT GAACGACAAA
ATGGAGCAAG ATAACGGCTA TCAAGTGGTG AAACACAGCT TTATCAATAT GAGCTCCCGC
ACCTCTGCCT TTATTTTTGC CGAACTGACG AAAGGCGAAG ACCGCGAAGT CGATGGCGTG
ACGATTGCTG CCGCATGGCG TGAACAATTG CCCGAGCTTC TATCGGTCAA AAAACTCAGC
TTTAACGCGA GCACTAACGA TGCCGGTGGC GATATTTCCT TCAGGTTGAC CTCAAGCGAT
CTCGATGAAC TGTCCGCTGC CTCTAAAGAG TTGAAACAAA AACTCGCCAG CTATGAAGGC
GTGTACGATA TTGCCGACAA CTTCTCCTCG GGCAGTCATG AAATTCGCCT GAAGATACGT
CCAGAGGCGG AAGCCCTTGG CCTGACCCTT TCCGATTTAG CCCGCCAAGT GCGTTACGGT
TTCTATGGTT ATGAAGCCCA ACGTATTTTG CGTAATAAAG AAGAAATTAA GGTAATGGTG
CGCTACCCAT TAGAGCAGCG CCGCACTGTG GGTTATCTGG AAAACATGCT GATCCGCACG
CCAACGGGCA CCTCGGTTCC CTTCTCGACC GTGGCACAAA TTGAGAAAGG CGAATCCTAC
GCCTCAATTA CCCGTGTTGA CGGTAAGCGA GCGATCACCA TCACGGCAAA TGCCAACAAA
AACATAGTTG AACCTTCAAA AGTGGTACAG GAAATCCAAA AAGATTACCT GCCACAATTA
CAGGCCAAGT ATCCTAAAAT CCAAACCGCG CTGGATGGCG GCAGTTTGGA TGAACAGAAT
GCTATGGTCG GTTTGATGCA AGGTTTCTTC TTTGCGCTGT TTACCATTTA TGCCCTGATG
GCAATCCCAC TAAAATCCTA CAGTCAGCCG TTGATCATCA TGTCGGTGAT CCCCTTCGGG
ATTATCGGCG CACTGTTTGG TCACTTGATT CAGGGACTCG CGATGAGCGT GTTAAGTCTC
TGCGGCATAG TGGCACTCGC GGGTGTGGTG GTGAACGACT CTTTGATTTT GGTCGACTTT
GTTAACCGTG CGCGGGAGCA AGGCCTATCG GTCAGACAAG CGGCAGTGGA TTCGGGCTGT
TATCGCTTTA GGGCGATCAT CCTCACGTCA CTCACTACCT TTGTCGGCTT AGTGCCTATT
ATTCTCGAGC GCAGTTTGCA GGCGCAAATT GTGATCCCTA TGGCGACGTC CCTCGCCTTC
GGTATCCTGT TCTCGACTGT AGTGACGCTG ATCTTAGTGC CGCTGCTGTA CATCATACTC
GACGATGTTA GCCGCTCTAG CAGCCGCTTC TTCAACTGGT GGTGGCAGCC TAAAAAAACC
AATGATGAAG ACGTTAAGCA TCCGGATTTT GAGCAAGCTG TCACGACTGA CTATAAGAAA
GACTATTTAT AG
 
Protein sequence
MDTQKGILAW FARNSVAANL LMWALLVGGL FSTVLINKEV FPSFELNLLN ISVAYPGAAP 
QEIEEGINIK IEEAIQDING IKKVTSVASE GVGSITVEVE DGYEVQTVLD EAKLRLDAIS
TFPVNIEKPN IYQIKPENNV IWVSVYGDMT LHDMKELAKS VRDDLTQLPA VTRAKVTGVR
DYEIAIEVSE DKLREYGLTF TQVALAVQNS SFDLPGGSIR AQDGDILLRT KGQAYTGDDF
ANIVVTTRPD GSRVMLPQVA TIKDDFEERL EYTRFNGKPA AIIEVTSVDD QNALDIAAQV
KQYVEDRRAT LPANAQLDTW GDMTHYLKGR LNMMMSNMFY GALLVFIILA MFLDLKLAFW
VMMGLPVCFL GTMLIMPLEP FSMTINMLTL FAFILVLGIV VDDAIVIGES AYTEVERHGH
SVDNVIRGAQ KVAMPATFGV LTTIAAFIPM LMVSGPMGII WKSIGMVVIL CLAFSLVESK
FILPAHLAHM KFKKPGAPRG FFGRLKANFN DRVQHFIHHS YRNFLERCIK QRYNVVAAFI
GVLVLSIALV ASGKVRWVFF PDIPSDFIQV QLEMDEGSSE ENTLKVVQSI EEALYKMNDK
MEQDNGYQVV KHSFINMSSR TSAFIFAELT KGEDREVDGV TIAAAWREQL PELLSVKKLS
FNASTNDAGG DISFRLTSSD LDELSAASKE LKQKLASYEG VYDIADNFSS GSHEIRLKIR
PEAEALGLTL SDLARQVRYG FYGYEAQRIL RNKEEIKVMV RYPLEQRRTV GYLENMLIRT
PTGTSVPFST VAQIEKGESY ASITRVDGKR AITITANANK NIVEPSKVVQ EIQKDYLPQL
QAKYPKIQTA LDGGSLDEQN AMVGLMQGFF FALFTIYALM AIPLKSYSQP LIIMSVIPFG
IIGALFGHLI QGLAMSVLSL CGIVALAGVV VNDSLILVDF VNRAREQGLS VRQAAVDSGC
YRFRAIILTS LTTFVGLVPI ILERSLQAQI VIPMATSLAF GILFSTVVTL ILVPLLYIIL
DDVSRSSSRF FNWWWQPKKT NDEDVKHPDF EQAVTTDYKK DYL