Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3529 |
Symbol | |
ID | 5370806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4195687 |
End bp | 4198878 |
Gene Length | 3192 bp |
Protein Length | 1063 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640831789 |
Product | acriflavin resistance protein |
Protein accession | YP_001367719 |
Protein GI | 153002038 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACTC AAAAAGGGAT CTTAGCCTGG TTCGCCCGCA ACAGTGTGGC CGCGAACCTG TTAATGTGGG CATTACTCGT CGGCGGTTTG TTTAGCACTG TCTTGATCAA TAAAGAGGTT TTTCCTTCTT TCGAACTCAA TTTACTGAAT ATTTCCGTCG CCTATCCAGG CGCGGCGCCG CAGGAAATCG AAGAAGGCAT CAACATCAAG ATTGAGGAAG CCATCCAAGA TATCAACGGT ATCAAGAAGG TCACATCAGT GGCGAGCGAA GGGGTAGGCT CGATTACGGT TGAAGTTGAA GACGGTTACG AAGTGCAAAC CGTGCTCGAT GAAGCCAAAC TGAGATTAGA TGCGATTTCG ACCTTCCCAG TGAACATCGA AAAACCCAAT ATCTATCAGA TTAAACCTGA AAATAACGTC ATTTGGGTGT CTGTCTATGG CGATATGACA CTGCACGATA TGAAGGAGTT GGCTAAGTCG GTGCGTGACG ATTTAACCCA ACTGCCAGCC GTGACCCGAG CCAAAGTCAC TGGAGTGCGC GATTATGAAA TCGCCATCGA AGTATCAGAA GATAAGCTAC GCGAATACGG CCTAACATTT ACACAGGTCG CGTTAGCAGT GCAAAACTCT TCCTTTGACT TACCCGGCGG TTCGATTCGC GCCCAAGATG GCGACATCCT GCTGCGCACC AAAGGCCAAG CCTACACGGG TGATGACTTT GCGAATATCG TCGTCACCAC TCGCCCCGAC GGTAGCCGCG TGATGTTGCC GCAAGTGGCA ACCATCAAAG ATGATTTTGA AGAACGTTTA GAATACACCC GCTTTAACGG TAAACCGGCC GCGATTATCG AAGTCACCAG TGTTGATGAT CAAAATGCCT TAGACATTGC CGCTCAAGTA AAACAATACG TCGAGGATCG CCGCGCGACG CTTCCTGCCA ACGCGCAACT CGATACTTGG GGTGATATGA CTCACTACCT CAAGGGCCGC TTAAACATGA TGATGTCGAA CATGTTTTAC GGTGCCTTGC TGGTGTTTAT CATCCTAGCT ATGTTCCTCG ATCTTAAGTT GGCGTTTTGG GTCATGATGG GTCTGCCGGT GTGCTTCCTC GGCACTATGC TGATCATGCC GCTCGAACCT TTCTCGATGA CGATCAACAT GTTAACCCTG TTCGCCTTTA TCTTAGTGCT CGGGATAGTG GTGGACGATG CGATTGTCAT CGGCGAGAGC GCCTACACAG AAGTCGAACG CCACGGTCAC TCGGTTGACA ATGTGATCCG CGGCGCGCAA AAAGTGGCAA TGCCCGCGAC CTTCGGGGTA TTAACCACGA TTGCGGCCTT TATTCCCATG TTAATGGTTT CTGGCCCTAT GGGAATTATC TGGAAATCCA TCGGCATGGT GGTCATCCTC TGTTTGGCCT TCTCGCTGGT CGAATCTAAG TTCATCCTGC CAGCGCATTT AGCGCACATG AAGTTTAAAA AGCCCGGTGC GCCAAGGGGA TTCTTTGGTC GCCTCAAAGC CAACTTTAAC GACAGAGTGC AGCACTTTAT TCACCACAGT TATCGCAACT TCCTCGAGCG CTGTATCAAG CAAAGATACA ACGTGGTCGC GGCCTTTATC GGTGTGTTGG TCCTGTCTAT TGCCTTAGTC GCCAGTGGTA AAGTGCGTTG GGTATTCTTC CCTGATATTC CCTCGGACTT CATTCAAGTT CAGCTTGAGA TGGACGAAGG CAGCTCGGAA GAGAACACTT TGAAAGTGGT GCAGAGCATA GAAGAAGCCC TGTACAAGAT GAACGACAAA ATGGAGCAAG ATAACGGCTA TCAAGTGGTG AAACACAGCT TTATCAATAT GAGCTCCCGC ACCTCTGCCT TTATTTTTGC CGAACTGACG AAAGGCGAAG ACCGCGAAGT CGATGGCGTG ACGATTGCTG CCGCATGGCG TGAACAATTG CCCGAGCTTC TATCGGTCAA AAAACTCAGC TTTAACGCGA GCACTAACGA TGCCGGTGGC GATATTTCCT TCAGGTTGAC CTCAAGCGAT CTCGATGAAC TGTCCGCTGC CTCTAAAGAG TTGAAACAAA AACTCGCCAG CTATGAAGGC GTGTACGATA TTGCCGACAA CTTCTCCTCG GGCAGTCATG AAATTCGCCT GAAGATACGT CCAGAGGCGG AAGCCCTTGG CCTGACCCTT TCCGATTTAG CCCGCCAAGT GCGTTACGGT TTCTATGGTT ATGAAGCCCA ACGTATTTTG CGTAATAAAG AAGAAATTAA GGTAATGGTG CGCTACCCAT TAGAGCAGCG CCGCACTGTG GGTTATCTGG AAAACATGCT GATCCGCACG CCAACGGGCA CCTCGGTTCC CTTCTCGACC GTGGCACAAA TTGAGAAAGG CGAATCCTAC GCCTCAATTA CCCGTGTTGA CGGTAAGCGA GCGATCACCA TCACGGCAAA TGCCAACAAA AACATAGTTG AACCTTCAAA AGTGGTACAG GAAATCCAAA AAGATTACCT GCCACAATTA CAGGCCAAGT ATCCTAAAAT CCAAACCGCG CTGGATGGCG GCAGTTTGGA TGAACAGAAT GCTATGGTCG GTTTGATGCA AGGTTTCTTC TTTGCGCTGT TTACCATTTA TGCCCTGATG GCAATCCCAC TAAAATCCTA CAGTCAGCCG TTGATCATCA TGTCGGTGAT CCCCTTCGGG ATTATCGGCG CACTGTTTGG TCACTTGATT CAGGGACTCG CGATGAGCGT GTTAAGTCTC TGCGGCATAG TGGCACTCGC GGGTGTGGTG GTGAACGACT CTTTGATTTT GGTCGACTTT GTTAACCGTG CGCGGGAGCA AGGCCTATCG GTCAGACAAG CGGCAGTGGA TTCGGGCTGT TATCGCTTTA GGGCGATCAT CCTCACGTCA CTCACTACCT TTGTCGGCTT AGTGCCTATT ATTCTCGAGC GCAGTTTGCA GGCGCAAATT GTGATCCCTA TGGCGACGTC CCTCGCCTTC GGTATCCTGT TCTCGACTGT AGTGACGCTG ATCTTAGTGC CGCTGCTGTA CATCATACTC GACGATGTTA GCCGCTCTAG CAGCCGCTTC TTCAACTGGT GGTGGCAGCC TAAAAAAACC AATGATGAAG ACGTTAAGCA TCCGGATTTT GAGCAAGCTG TCACGACTGA CTATAAGAAA GACTATTTAT AG
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Protein sequence | MDTQKGILAW FARNSVAANL LMWALLVGGL FSTVLINKEV FPSFELNLLN ISVAYPGAAP QEIEEGINIK IEEAIQDING IKKVTSVASE GVGSITVEVE DGYEVQTVLD EAKLRLDAIS TFPVNIEKPN IYQIKPENNV IWVSVYGDMT LHDMKELAKS VRDDLTQLPA VTRAKVTGVR DYEIAIEVSE DKLREYGLTF TQVALAVQNS SFDLPGGSIR AQDGDILLRT KGQAYTGDDF ANIVVTTRPD GSRVMLPQVA TIKDDFEERL EYTRFNGKPA AIIEVTSVDD QNALDIAAQV KQYVEDRRAT LPANAQLDTW GDMTHYLKGR LNMMMSNMFY GALLVFIILA MFLDLKLAFW VMMGLPVCFL GTMLIMPLEP FSMTINMLTL FAFILVLGIV VDDAIVIGES AYTEVERHGH SVDNVIRGAQ KVAMPATFGV LTTIAAFIPM LMVSGPMGII WKSIGMVVIL CLAFSLVESK FILPAHLAHM KFKKPGAPRG FFGRLKANFN DRVQHFIHHS YRNFLERCIK QRYNVVAAFI GVLVLSIALV ASGKVRWVFF PDIPSDFIQV QLEMDEGSSE ENTLKVVQSI EEALYKMNDK MEQDNGYQVV KHSFINMSSR TSAFIFAELT KGEDREVDGV TIAAAWREQL PELLSVKKLS FNASTNDAGG DISFRLTSSD LDELSAASKE LKQKLASYEG VYDIADNFSS GSHEIRLKIR PEAEALGLTL SDLARQVRYG FYGYEAQRIL RNKEEIKVMV RYPLEQRRTV GYLENMLIRT PTGTSVPFST VAQIEKGESY ASITRVDGKR AITITANANK NIVEPSKVVQ EIQKDYLPQL QAKYPKIQTA LDGGSLDEQN AMVGLMQGFF FALFTIYALM AIPLKSYSQP LIIMSVIPFG IIGALFGHLI QGLAMSVLSL CGIVALAGVV VNDSLILVDF VNRAREQGLS VRQAAVDSGC YRFRAIILTS LTTFVGLVPI ILERSLQAQI VIPMATSLAF GILFSTVVTL ILVPLLYIIL DDVSRSSSRF FNWWWQPKKT NDEDVKHPDF EQAVTTDYKK DYL
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