| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3487 |
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| Symbol | mdoD |
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| ID | 5372276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4142744 |
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| End bp | 4144570 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640831747 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_001367677 |
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| Protein GI | 153001996 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000242416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGATT CTGGCGAATT GTTGCTGATC GCTGTATTGT TACCTCTGTC ATCAACAGTT
CTCCACAGGG CCATCGCTGC AAATTTAGTT AGATTTGCAG GGAAGTGTCA GGAAGTTACA
CCAATTCAGA GTCTGCTTAT GCAACCCAAT TTATTTCCCG AACAAAGAAA CGTTTACCAA
CAATCGATGG TGACAGTACC TTCGATTGAA GCCCAATCCT CCTCTCGTCG CGGCCGTTTG
CAGCGCATGG TTGGCAGCGT ATTGTTAACC TGTAGCGTAT TGCTGAGTCT TTCGGCGTGT
GCAGCGGGTA AGCAGGCGTC ACCACAAGAA GGTGAAGAGT TCAGTTACGC TTGGCTTAAG
GGCTACGCCC GTACTATGGC TGCACAACCT TATGAAAGCC ATAAAGGCGA ATTGCCTAAA
AGCCTTCAGG GCATGAGCTG GGATGATTAC CAACAATTCC ACTTCAAGAA GAAAGCCGCA
CTGTGGCGCG ATCAGGACTC GGAGTTTCGT GCCGAGCTGT TCCACCTAGG GCTGTATTTC
GACACGCCAA TTCACATCTA TGAGTTGAAT GAAGGCAAGG CTAAGTTAAT CGACTATTCG
CCTTCTATGT TCGATTACGG CAAGTCAAAG GTGAAAGGCA GTCAGTTGCC TAAGGATCTT
GGCTTTGCGG GTTTCCGTAT GCAGTTCAAT ACCGATTGGG AACGTGACGT TGTCGCCTTC
CTTGGCGCCA GTTATTTCCG CGCAGTGGGT CATGAGATGC AATACGGCCT GTCGGCTCGT
GGTTTAGCGG TGGATACTGC GCTGCCAAAA CCTGAAGAGT TTCCAATGTT CACTGACTTC
TGGTTAGAAA AACCTAAGCC AGGATCGAAT ATCACGACTG TGTATGCCTT GTTAGACTCA
CCGAGTGTGA CAGGTGCTTA CCGTTTTGAT ATCGAGCCGG GTGAGCGTTT AAAAATGAAA
GTGGATGTGG CTGTTTATCC ACGTAAAGCG ATTGAACGTT TAGGCGTAGC GCCACTGACC
AGTATGTTTA TGGTGGGTGA GAACGATCGC CGCACCGGTT ACGACTGGCG TCCAGAAATC
CATGATACCG ATGGCTTAGC CATGCATACG GGTAATGGTG AATGGATTTG GCGTCCGCTA
GGTAACCCAG AAAACCTACG ATTCAACGCC TATAGCGATG AAAATCCAAA AGGTTTTGGC
TTACTGCAAC GTGACCGCAA CTTCGATCAC TATCAGGATG ACGGCGTGTT TTACGATAAA
CGCCCAAGCC TGTGGATTGA ACCAACCAGC AGTTGGGGTA AAGGTTCAGT GCAGTTAGTT
GAAATCCCAA CACTGGATGA AACCTTCGAT AACATAGTCG CATTTTGGAA TCCTGCTGAG
CCGATTGTTC CGGGTCAAGA GCTGCTGTAT AGCTACAACA TGTATTGGGG CGGCATTCCA
CCGGTTCAAT CACCCCGTGC TCGCGTTGTT GATACCTTCA CCGGGATTGG CGGCGTAGTT
GGCCAGAAAC GCAAATACTA CAGTAAGCGT TTTGTGGTGG ATTTCGCGGG CGGCACTTTG
CCTATGATAG GTAAAGACAC CCAAGTAAAA GCTGTGATCA CTGCATCTGA AGGCAAAGTC
GAAATTGAAT CTGCCCGTCC TCTAGCGTCC ATTAATGGTT ACCGCGCTAT GTTTGACGTA
GTGCCACCCG GAGACGGTAC TGAGCCGATT AACCTGAGAG TCTATTTGGA AGTCGATGGT
CAGCCATTGT CTGAAACTTG GATGTATCAG TGGAATCCGC CTGCTAAGGA TGATCGTGAA
TTGCACAATG CGGGTCATCT GCAATAA
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| Protein sequence | MLDSGELLLI AVLLPLSSTV LHRAIAANLV RFAGKCQEVT PIQSLLMQPN LFPEQRNVYQ
QSMVTVPSIE AQSSSRRGRL QRMVGSVLLT CSVLLSLSAC AAGKQASPQE GEEFSYAWLK
GYARTMAAQP YESHKGELPK SLQGMSWDDY QQFHFKKKAA LWRDQDSEFR AELFHLGLYF
DTPIHIYELN EGKAKLIDYS PSMFDYGKSK VKGSQLPKDL GFAGFRMQFN TDWERDVVAF
LGASYFRAVG HEMQYGLSAR GLAVDTALPK PEEFPMFTDF WLEKPKPGSN ITTVYALLDS
PSVTGAYRFD IEPGERLKMK VDVAVYPRKA IERLGVAPLT SMFMVGENDR RTGYDWRPEI
HDTDGLAMHT GNGEWIWRPL GNPENLRFNA YSDENPKGFG LLQRDRNFDH YQDDGVFYDK
RPSLWIEPTS SWGKGSVQLV EIPTLDETFD NIVAFWNPAE PIVPGQELLY SYNMYWGGIP
PVQSPRARVV DTFTGIGGVV GQKRKYYSKR FVVDFAGGTL PMIGKDTQVK AVITASEGKV
EIESARPLAS INGYRAMFDV VPPGDGTEPI NLRVYLEVDG QPLSETWMYQ WNPPAKDDRE
LHNAGHLQ
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