| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3461 |
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| Symbol | |
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| ID | 5370944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4109283 |
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| End bp | 4110011 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640831721 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001367651 |
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| Protein GI | 153001970 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCCTTG CAAAATACCT CGCCCAGTGT GGCATAGGCT CACGCCGTGA AGCCTGCCGT
TTGATTGAGG CCGGACGCAT TACACTCAAT GGCCATATCG CCCGCCACAC AGATCCCGTC
CGTTTAGGCG AGTCATTAAA TTGCCTCGAC AATATTGAGC TTGATGGCGC ACCCATCACA
AAAACCGAAA CACTCGCCTA CTGGGTATTG AACAAAGCCG TAGGCACAGA TTGCCGTCTG
CTGGAGCAGG ATGAAACGAG TCTTATACAC CTACTTCCCA AAGCGCCAAG ACTCTATCCC
GTCGGCAGGC TCGATAAGGA TTCCCGCGGC CTACTGCTGT TAACTAATGA TGGTGAGCTA
ACCCATAAAC TCATGCACCC CAGTTTTGCC CACAGCAAAA CCTACCATGT GCACCTCAAC
CGGCCATTCA CTGATGAGTT TGTTGAACAA ATGGCCAGTG GAGTGCGTTA TAAAGATGTG
CAAACCTTGC CCTGCCAAGT CCGCCGCCTC AGTTCGGACA GCTTTGAAAT CGTACTGACT
CAAGGACTAA ATCGACAAAT TCGTAGGATG TCCAAGGCAC TCGGATATCG CGTTATCGAT
CTTGAGCGCG TCGCCATAAT GACGCTAAAT TTACGCGAAT TAGCATTGGG TGAGTTACAA
GAAGGTCAAA TGCGGCGATT AACAGAATCG GAAGTTGCAG AGCTAAAAGC AGTACTGGCG
ATGAAATAA
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| Protein sequence | MRLAKYLAQC GIGSRREACR LIEAGRITLN GHIARHTDPV RLGESLNCLD NIELDGAPIT
KTETLAYWVL NKAVGTDCRL LEQDETSLIH LLPKAPRLYP VGRLDKDSRG LLLLTNDGEL
THKLMHPSFA HSKTYHVHLN RPFTDEFVEQ MASGVRYKDV QTLPCQVRRL SSDSFEIVLT
QGLNRQIRRM SKALGYRVID LERVAIMTLN LRELALGELQ EGQMRRLTES EVAELKAVLA
MK
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