Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3441 |
Symbol | |
ID | 5373809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4084939 |
End bp | 4086141 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640831701 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_001367631 |
Protein GI | 153001950 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.837811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTGC GGAGCTCTGT CCTGAGAGCA TGTTCACGTC TGTTAGAACC ATGGGCTCGT TTGATGTCAG GGAGAGTATT AAAAATGCGT AAGTTTGGGA GTGTACTCAT CTTAATGCTG CTGATGGGGC TGAGCGGTTG TAATCCCGCA GCCAGTGATG CGCAAAGCGT AGCCGTTTCC CATGCCGCAA CGGATGACCC CCAAGCTATC CCCACTATTG AATGGCGCCT TGCGACCTCT TGGCCTAAAA ACTTCCCCGG TTTAGGTATG GCTCCCGAAC GCTTTGCCCA TTTAGTCAAT GAAATGTCTA ACGGTCGGTT AAAGATCCAG GTTTATGGCG CGGGGGAGTT AATGCCAGCG TTTGCCGTAT TTGATGGTGT GAGTCAGGGT AAAATTCAAA TGGCCCATGC CGCTTCTTAC TACTGGAAAG GCAAGGCACC CGCGGCGCAG TTTTTTTCAT CGATTCCCTT TGGTATGACG GCGCAGGAAA TGAACGGCTG GCTACACTAC GGCGGTGGCA TGGCGTTGTG GGATGAAGTG TATCGCCCCT TTGGCATCAT TCCCCTCGCG GGTGGCAATA CGGGCATGCA AATGGGCGGC TGGTTCAATA AACCGATTAA TACGATTGCC GATTTTAAGG GATTGAAGAT CCGTATGCCG GGCTTGGGCG GCGAAGTATT AAAGCGTGTC GGTGCTATTC CTGTGAATAT GGCGGGGCGT GAACTCTATG GTGCATTGCA AACAGGCTCG ATTGATGCGG CTGAGTGGGT AGGGCCATTG AACGACCTTG CTTTCGGTTT ACATAAAGTG GCGAAGTACT ACTATTACCC TGGTTGGCAT GAGCCGGGTT CTAATATGGA ATTCTTGATT AATAAAGCCG CCTTCGAGAG TTTACCTCAA GATTTACAAG CCATAGTTAA AGTCGCGGCG AGAGCCATTA ATCAAGATAT GCTGGATGAA TACACGACCC ATAATGTGGC CGCCCTTGAA ACCTTAGTGA ATGATGAAGG AGTGGTGCTT AAGGCGTTTC CACCGAAAGT GTTGTTGGAA CTTGAGAAAA TATCTAAACA AGTGATTGAA GAGCAAGCTA ATCAAGATCC CTTAATGCGC AAAGTGTACG CCGCCTATCA CGCCTACGAG CAAGGTGTGC GCCAGTATCA TAAAATATCT GAGGATGCTT ACAGCCAACA GCGCCAACAC TAA
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Protein sequence | MRLRSSVLRA CSRLLEPWAR LMSGRVLKMR KFGSVLILML LMGLSGCNPA ASDAQSVAVS HAATDDPQAI PTIEWRLATS WPKNFPGLGM APERFAHLVN EMSNGRLKIQ VYGAGELMPA FAVFDGVSQG KIQMAHAASY YWKGKAPAAQ FFSSIPFGMT AQEMNGWLHY GGGMALWDEV YRPFGIIPLA GGNTGMQMGG WFNKPINTIA DFKGLKIRMP GLGGEVLKRV GAIPVNMAGR ELYGALQTGS IDAAEWVGPL NDLAFGLHKV AKYYYYPGWH EPGSNMEFLI NKAAFESLPQ DLQAIVKVAA RAINQDMLDE YTTHNVAALE TLVNDEGVVL KAFPPKVLLE LEKISKQVIE EQANQDPLMR KVYAAYHAYE QGVRQYHKIS EDAYSQQRQH
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