Gene Shew185_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3389 
Symbol 
ID5372621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp4023484 
End bp4024146 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content47% 
IMG OID640831649 
Productribose-5-phosphate isomerase A 
Protein accessionYP_001367579 
Protein GI153001898 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAG ATGAAATGAA AAAAGCTGCC GGTTGGGCCG CGCTCAAGTA CGTTGAAAAA 
GACAGCATTG TTGGTGTTGG TACGGGTTCG ACTGTGAATC ACTTTATTGA TGCACTGGCG 
ACCATGAAAG CTGATATCGA AGGCGCAGTC TCTAGCTCTG AGGCATCAAC TCAGAAAATG 
AAAGCGCTGG GTATTCCCGT TTATGACTTA AACAGCGTTG ATCGTTTATC TGTCTATGTG 
GACGGTGCCG ATGAAATCAA CGACCATATG GATATGATCA AAGGCGGCGG CGCGGCGTTA 
ACTCGTGAGA AAATTGTCGC GGCTGTGGCT GAAAAGTTTA TCTGTATCGT TGATAACACT 
AAGCAAGTCG ACATCCTAGG TGAATTCCCA CTGCCAGTTG AAGTCATTCC TATGGCGCGC 
TCTTATGTGG CACGTCAGTT AGTTAAGCTA GGCGGCGATC CTGTGTACCG TGAAGGCGTT 
GTGACCGATA ACGGCAACGT GATCCTCGAT GTGTACAATC TTAAGATCCT TAATCCAAAA 
GAATTGGAAA GTCAGATCAA TGAGATAGTC GGCGTTGTCA CTAACGGTCT GTTCGCTAAA 
CGCGGCGCAG ATGTGTTACT CGTTGGCACC CCTGATGGCG TAAAAACCTT TACCGCCAAA 
TAA
 
Protein sequence
MTQDEMKKAA GWAALKYVEK DSIVGVGTGS TVNHFIDALA TMKADIEGAV SSSEASTQKM 
KALGIPVYDL NSVDRLSVYV DGADEINDHM DMIKGGGAAL TREKIVAAVA EKFICIVDNT 
KQVDILGEFP LPVEVIPMAR SYVARQLVKL GGDPVYREGV VTDNGNVILD VYNLKILNPK 
ELESQINEIV GVVTNGLFAK RGADVLLVGT PDGVKTFTAK